DESCRIPTION

Package: CrossTalkeR
Title: Single Cell Ligand Receptor Downstream analysis
Version: 1.2.1
Authors@R:c(
    person(given = "James Shiniti",
           family = "Nagai",
           role = c("aut", "cre"),
           email = "james.nagai@gmail.com",
           comment = c(ORCID = "0000-0002-7655-7206")),
    person(given = "Nils",
                  family = "Leimkühler",
                  role = c("aut"),
                  comment = c(ORCID = "0000-0003-2530-4329")),
    person(given = "Michael T. ",
                  family = "Schaub",
                  role = c("aut"),
                  comment = c(ORCID = "0000-0003-2426-6404")),
    person(given = "Rebekka",
         family = "Schneider",
         role = c("aut"),
         comment = c(ORCID = "0000-0002-0749-1565")),
    person(given = " Ivan Costa",
            family = "Gesteira",
            role = c("aut"),
            email = "ivan.costa@rwth-aachen.de",
            comment = c(ORCID = "0000-0003-2890-8697")))
Description: This Package allows the network based analysis over ligand receptor network infered data.
URL: https://github.com/CostaLab/CrossTalkeR
BugReports: https://github.com/CostaLab/CrossTalkeR/issues
License: MIT + file LICENSE
biocViews:  Network, SystemsBiology, SingleCell, Software, GraphAndNetwork
Encoding: UTF-8
LazyData: TRUE
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.1
Imports:
    pals (>= 1.1),
    graphlayouts (>= 0.7.0),
    ggraph (>= 2.0.3),
    ggplot2 (>= 3.2.3),
    patchwork (>= 1.0.1),
    stringr (>= 1.4.0),
    tidyr (>= 1.1.2),
    tibble (>= 3.0.4),
    dplyr (>= 1.0.2),
    igraph (>= 1.2.6),
    reshape2 (>= 1.4.4),
    RColorBrewer (>= 1.1.2),
    boot (>= 1.3.25),
    rmarkdown(>= 2.5),
    scales(>= 1.1),
    oce (>= 1.2),
    netdiffuseR (>= 1.22.0),
    ggalluvial (>= 0.12.2),
    DT (>= 0.16),
    htmltools (>= 0.5.0),
    factoextra (>= 1.0.7),
    colorBlindness (>= 0.1.6),
    clusterProfiler (>= 3.18.0),
    org.Hs.eg.db (>= 3.12.0),
    ComplexHeatmap (>= 2.6.2),
    extrafont (>= 0.17),
    Seurat (>= 4.0.3),
    ggridges (>= 0.5.3),
    ggnewscale (>= 0.4.5),
    gtools (>= 3.9.2),
    ggsci (>= 2.9),
    Rmagic (>= 2.0.3),
    methods,
    qpdf
Suggests:
    knitr,
    rmarkdown
VignetteBuilder: knitr