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test failures #61

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maelle opened this issue Dec 17, 2021 · 4 comments
Closed

test failures #61

maelle opened this issue Dec 17, 2021 · 4 comments

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@maelle
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maelle commented Dec 17, 2021

πŸ‘‹ here! I'm investigating the problems seen at https://github.com/r-universe/ropensci/actions/runs/1574868078 when building the package and its docs

I've run the test locally and gotten

==> devtools::test()

β„Ή Loading nbaR
β„Ή Testing nbaR
βœ“ | F W S  OK | Context
⠏ |         0 | Testing class Agent             <Agent>
Fields:
	agentText:	 TSuYEiHZJjtNsw 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class Agent [0.1s]
βœ“ |     1   4 | apiClient [0.5s]                
────────────────────────────────────────────────
Skip (test-apiClient.R:3:1): Constructor works
Reason: empty test
────────────────────────────────────────────────
⠏ |         0 | Testing class AssociatedTaxon   <AssociatedTaxon>
Fields:
	name:	 TSuYEiHZJjtNsw 
	relationType:	 wGUOAInYiyjblsDe 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class AssociatedTaxon
⠏ |         0 | Testing class BioStratigraphy   <BioStratigraphy>
Fields:
	youngBioDatingQualifier:	 dEkFjo 
	youngBioName:	 RacWfsApPu 
	youngFossilZone:	 DwYauXP 
	youngFossilSubZone:	 yOacXdAwYpZRf 
	youngBioCertainty:	 gYabwKeLtFmrqRIspnM 
	youngStratType:	 zEeFVwaGpDXWiZMoYuHL 
	bioDatingQualifier:	 LVBi 
	bioPreferredFlag:	 FALSE 
	rangePosition:	 rPU 
	oldBioName:	 voZrDiJAISXCatugfEO 
	bioIdentifier:	 NCaIGn 
	oldFossilzone:	 KTF 
	oldFossilSubzone:	 znlAuYSGqN 
	oldBioCertainty:	 aCJLpUmrsNedqFOftKPy 
	oldBioStratType:	 HQRdu 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class BioStratigraphy
⠏ |         0 | Testing class ChronoStratigraphy<ChronoStratigraphy>
Fields:
	youngRegionalSubstage:	 QPhdmINeESbyqwCak 
	youngRegionalStage:	 bF 
	youngRegionalSeries:	 qYLXh 
	youngDatingQualifier:	 wLmBNuRhHrljWg 
	youngInternSystem:	 QTP 
	youngInternSubstage:	 hnucDZJbxGCa 
	youngInternStage:	 BJuViFHNPrdR 
	youngInternSeries:	 pBbwyEDmHcuQrx 
	youngInternErathem:	 U 
	youngInternEonothem:	 PBNnyMC 
	youngChronoName:	 wsUoNxkVzdfcyJX 
	youngCertainty:	 LeWJgAC 
	oldDatingQualifier:	 TUHbWLoy 
	chronoPreferredFlag:	 FALSE 
	oldRegionalSubstage:	 GqzvMstY 
	oldRegionalStage:	 YlN 
	oldRegionalSeries:	 v 
	oldInternSystem:	 QxFgJjzOolwY 
	oldInternSubstage:	 K 
	oldInternStage:	 fbwovYPBKgpyZsV 
	oldInternSeries:	 Jd 
	oldInternErathem:	 UVNvhIZfpSoGqaygC 
	oldInternEonothem:	 gZRbf 
	oldChronoName:	 uhz 
	chronoIdentifier:	 LqRDOewvlmrPJsVHNY 
	oldCertainty:	 TXZYyrcRUeLoVpqDJP 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class ChronoStratigraphy
⠏ |         0 | Testing class Crs               <Crs>
Fields:
	type:	 hMKafX 
	properties:	list of length 2 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class Crs
⠏ |         0 | Testing class DefaultClassification<DefaultClassification>
Fields:
	kingdom:	 vQRWoIOtM 
	phylum:	 KzEFmLBycCUfOHIGPhDt 
	className:	 gRAfdhFLSyuTExPHtmG 
	order:	 RmZBJtOvKurVsTySiP 
	superFamily:	 fyFEHQNe 
	family:	 VmUzSBtLdw 
	genus:	 hjXAPm 
	subgenus:	 jR 
	specificEpithet:	 fCKlJ 
	infraspecificEpithet:	 cKfLFDHhV 
	infraspecificRank:	 ALPJVkjzDBxFyodtCGOh 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class DefaultClassification
⠏ |         0 | Testing class Expert            <Expert>
Fields:
	agentText:	 nWaXtzbSKEmHjZVsI 
	fullName:	 hOcWJiEKmdM 
	organization:	object of class <Organization> 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class Expert
⠏ |         0 | Testing class Feature           <Feature>
Fields:
	crs:	object of class <Crs> 
	bbox:	list of length 10 
	properties:	list of length 2 
	geometry:	 
	id:	 NUotkZFCXqvITOlRyJwH 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class Feature
⠏ |         0 | Testing class FeatureCollection <FeatureCollection>
Fields:
	crs:	object of class <Crs> 
	bbox:	list of length 7 
	features:	list of length 1 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class FeatureCollection
⠏ |         0 | Testing class Filter            <Filter>
Fields:
	acceptRegexp:	 Gk 
	rejectRegexp:	 PmFdsBWwVznM 
	acceptValues:	list of length 6 
	rejectValues:	list of length 8 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class Filter
β Ό |         5 | Testing class GatheringEvent    <GatheringEvent>
Fields:
	projectTitle:	 OMUwLfczprK 
	worldRegion:	 lASHqz 
	continent:	 oiYMVHvJQ 
	country:	 VUMWODTCa 
	iso3166Code:	 CtFNcGbhKd 
	provinceState:	 cErobTgxZmltiR 
	island:	 RxpVDuwytIsgcPXNSfdQ 
	locality:	 QlDkOLX 
	city:	 RrJSmifIBlHawGUekN 
	sublocality:	 lnSrC 
	localityText:	 iQ 
	dateTimeBegin:	 1978-04-22 
	dateTimeEnd:	 1762-12-08 
	method:	 mDHYaAIw 
	altitude:	 FWPejKmRD 
	altitudeUnifOfMeasurement:	 TYArwqzNvsEIWFf 
	biotopeText:	 MraYOCkhBboDetjLnK 
	depth:	 LTN 
	depthUnitOfMeasurement:	 XcwjHKklJUExLZ 
	gatheringPersons:	list of length 9 
	gatheringOrganizations:	list of length 9 
	siteCoordinates:	list of length 9 
	namedAreas:	list of length 8 
	associatedTaxa:	list of length 5 
	chronoStratigraphy:	list of length 2 
	lithoStratigraphy:	list of length 4 
	bioStratigraphic:	list of length 6 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class GatheringEvent [0.2s]
⠏ |         0 | Testing class GatheringSiteCoordinates<GatheringSiteCoordinates>
Fields:
	longitudeDecimal:	 0.2092 
	latitudeDecimal:	 0.2144 
	gridCellSystem:	 U 
	gridLatitudeDecimal:	 0.2105 
	gridLongitudeDecimal:	 0.2885 
	gridCellCode:	 XHIyLextGwoTvKa 
	gridQualifier:	 O 
	geoShape:	object of class <Point> 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class GatheringSiteCoordinates
⠏ |         0 | Testing class GeoArea           <GeoArea>
Fields:
	sourceSystem:	object of class <SourceSystem> 
	sourceSystemId:	 nbFvawp 
	recordURI:	 UlFcwRXIfeivgYo 
	id:	 zaMpHuKJwnjYE 
	areaType:	 QALPsrFv 
	locality:	 pSkRWNsIfnV 
	shape:	 
	source:	 mGMZDcwJ 
	isoCode:	 gXr 
	countryNL:	 RpudKLsq 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class GeoArea
βœ“ |         7 | Testing GeoClient metadata endpoints [0.6s]
βœ“ |        13 | Testing miscellaneous GeoClient endpoints [1.3s]
βœ“ |         1 | Testing GeoClient query endpoints [0.1s]
βœ“ |         2 | geoClient                       
⠏ |         0 | Testing class GeoJsonObject     <GeoJsonObject>
Fields:
	crs:	object of class <Crs> 
	bbox:	list of length 10 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class GeoJsonObject
⠏ |         0 | Testing class GeometryCollection<GeometryCollection>
Fields:
	crs:	object of class <Crs> 
	bbox:	list of length 7 
	geometries:	list of length 10 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class GeometryCollection
⠏ |         0 | Testing class GroupByScientificNameQuerySpec<GroupByScientificNameQuerySpec>
Fields:
	constantScore:	 FALSE 
	fields:	list of length 6 
	conditions:	list of length 8 
	logicalOperator:	 cDZJbxGCaBwViFH 
	sortFields:	list of length 5 
	from:	 3 
	size:	 1 
	groupSort:	 pBbwyEDmHcuQrx 
	groupFilter:	object of class <Filter> 
	specimensFrom:	 4 
	specimensSize:	 0 
	specimensSortFields:	list of length 5 
	noTaxa:	 TRUE 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class GroupByScientificNameQuerySpec
⠏ |         0 | Testing class Iptc4xmpExt       <Iptc4xmpExt>
Fields:
	locationShown:	 PBNnyMC 
	worldRegion:	 wsUoNxkVzdfcyJX 
	countryCode:	 LeWJgAC 
	countryName:	 TUHbWLoy 
	provinceState:	 HGqyvMsYitlN 
	city:	 v 
	sublocation:	 QxFgJjzOolwY 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class Iptc4xmpExt
⠏ |         0 | Testing class LineString        <LineString>
Fields:
	crs:	object of class <Crs> 
	bbox:	list of length 8 
	coordinates:	list of length 8 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class LineString
⠏ |         0 | Testing class LithoStratigraphy <LithoStratigraphy>
Fields:
	qualifier:	 Olmy 
	preferredFlag:	 FALSE 
	member2:	 OpyvxVHNYR 
	member:	 zXZYyrcRUeLoVpqDJPhM 
	informalName2:	 afXzUwIQRWo 
	informalName:	 OzsMTKuEF 
	importedName2:	 LBKcCUf 
	importedName1:	 HIGPkhiDBgRAfdu 
	lithoIdentifier:	 LSRhTE 
	formation2:	 P 
	formationGroup2:	 FtyAGRmZ 
	formationGroup:	 Jt 
	formation:	 JKOyVzTptlSiPfF 
	certainty2:	 HQNep 
	certainty:	 UVSBtLd 
	bed2:	 hjXAPm 
	bed:	 jR 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class LithoStratigraphy
⠏ |         0 | Testing class LngLatAlt         <LngLatAlt>
Fields:
	longitude:	 0.1007 
	latitude:	 0.4165 
	altitude:	 0.9248 
	additionalElements:	list of length 9 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class LngLatAlt
βœ“ |   3 1  11 | metadataClient [1.0s]           
────────────────────────────────────────────────
Warning (test-metadataClient.R:13:3): Controlled lists work
javax.ws.rs.NotFoundException: RESTEASY003210: Could not find resource for full path: http://api.biodiversitydata.nl/v2/metadata/getControlledList/PhaseOrStage
Backtrace:
 1. testthat::expect_true(...) test-metadataClient.R:13:2
 4. mdc$get_controlled_list_phase_or_stage()
 5. self$handleError(response) /home/maelle/Documents/ropensci/nbaR/R/MetadataClient.r:240:8

Skip (test-metadataClient.R:20:1): GetRestServices works
Reason: empty test

Warning (test-metadataClient.R:33:5): Settings work
Status code:500
Internal Server Error
Exception: Invalid NBA setting: 3
Exception type: java.lang.IllegalArgumentException
Full stack trace stored in response object
Backtrace:
 1. mdc$get_setting(s) test-metadataClient.R:33:4
 2. self$handleError(response) /home/maelle/Documents/ropensci/nbaR/R/MetadataClient.r:395:8

Warning (test-metadataClient.R:33:5): Settings work
Status code:500
Internal Server Error
Exception: Invalid NBA setting: 15
Exception type: java.lang.IllegalArgumentException
Full stack trace stored in response object
Backtrace:
 1. mdc$get_setting(s) test-metadataClient.R:33:4
 2. self$handleError(response) /home/maelle/Documents/ropensci/nbaR/R/MetadataClient.r:395:8
────────────────────────────────────────────────
⠏ |         0 | Testing class Monomial          <Monomial>
Fields:
	rank:	 TSuYEiHZJjtNsw 
	name:	 wGUOAInYiyjblsDe 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class Monomial
⠏ |         0 | Testing class MultiLineString   <MultiLineString>
Fields:
	crs:	object of class <Crs> 
	bbox:	list of length 10 
	coordinates:	list of length 8 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class MultiLineString
βœ“ |        11 | Testing multimedia find functions [0.3s]
βœ“ |         7 | Testing multimedia metadata endpoints [0.5s]
βœ“ |       240 | Testing miscellaneous multimedia endpoints [113.1s]
βœ“ |        21 | Testing multimedia query endpoints [0.6s]
βœ“ |         2 | multimediaClient                
⠏ |         0 | Testing class MultiMediaContentIdentification<MultiMediaContentIdentification>
Fields:
	taxonRank:	 TSuYEiHZJjtNsw 
	scientificName:	object of class <ScientificName> 
	typeStatus:	 wGUOAInYiyjblsDe 
	dateIdentified:	 1933-01-04 
	defaultClassification:	object of class <DefaultClassification> 
	systemClassification:	list of length 5 
	vernacularNames:	list of length 5 
	identificationQualifiers:	list of length 9 
	identifiers:	list of length 3 
	taxonomicEnrichments:	list of length 2 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class MultiMediaContentIdentification [0.1s]
⠏ |        10 | Testing class MultiMediaGatheringEvent<MultiMediaGatheringEvent>
Fields:
	projectTitle:	 rPU 
	worldRegion:	 voZrDiJAISXCatugfEO 
	continent:	 NCaIGn 
	country:	 KTF 
	iso3166Code:	 znlAuYSGqN 
	provinceState:	 aCJLpUmrsNedqFOftKPy 
	island:	 HQRdu 
	locality:	 QPhdmINeESbyqwCak 
	city:	 bF 
	sublocality:	 qYLXh 
	localityText:	 wLmBNuRhHrljWg 
	dateTimeBegin:	 1904-11-18 
	dateTimeEnd:	 1771-05-19 
	method:	 JbZGCarBzViFHNPldR 
	altitude:	 pBbwyEDmHcuQrx 
	altitudeUnifOfMeasurement:	 U 
	biotopeText:	 PBNnyMC 
	depth:	 wsUoNxkVzdfcyJX 
	depthUnitOfMeasurement:	 LeWJgAC 
	gatheringPersons:	list of length 8 
	gatheringOrganizations:	list of length 4 
	siteCoordinates:	list of length 5 
	namedAreas:	list of length 8 
	associatedTaxa:	list of length 7 
	chronoStratigraphy:	list of length 9 
	lithoStratigraphy:	list of length 9 
	iptc:	object of class <Iptc4xmpExt> 
	bioStratigraphic:	list of length 5 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class MultiMediaGatheringEvent [0.1s]
β Ό |         5 | Testing class MultiMediaObject  <MultiMediaObject>
Fields:
	sourceSystem:	object of class <SourceSystem> 
	sourceSystemId:	 HGqyvMsYitlN 
	recordURI:	 v 
	id:	 QxFgJjzOolwY 
	sourceInstitutionID:	 K 
	sourceID:	 fbwovYPBKgpyZsV 
	owner:	 Jd 
	licenseType:	 UVNvhIZfpSoGqaygC 
	license:	 gZRbf 
	unitID:	 uhz 
	collectionType:	 LqRDOewvlmrPJsVHNY 
	title:	 TXZYyrcRUeLoVpqDJP 
	caption:	 hMKafX 
	description:	 vQRWoIOtM 
	serviceAccessPoints:	list of length 4 
	type:	 KEFmLBzcCUf 
	taxonCount:	 7 
	creator:	 HIGPkhiDBgRAfdu 
	copyrightText:	 LSRhTE 
	associatedSpecimenReference:	 P 
	associatedTaxonReference:	 FtyAGRmZ 
	multiMediaPublic:	 FALSE 
	subjectParts:	list of length 6 
	subjectOrientations:	list of length 10 
	phasesOrStages:	list of length 10 
	sexes:	list of length 7 
	gatheringEvents:	list of length 4 
	identifications:	list of length 1 
	theme:	list of length 9 
	associatedSpecimen:	object of class <Specimen> 
	associatedTaxon:	object of class <Taxon> 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class MultiMediaObject [0.2s]
⠏ |         0 | Testing class MultiPoint        <MultiPoint>
Fields:
	crs:	object of class <Crs> 
	bbox:	list of length 7 
	coordinates:	list of length 7 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class MultiPoint
⠏ |         0 | Testing class MultiPolygon      <MultiPolygon>
Fields:
	crs:	object of class <Crs> 
	bbox:	list of length 8 
	coordinates:	list of length 8 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class MultiPolygon
⠏ |         0 | Testing class NamedArea         <NamedArea>
Fields:
	areaClass:	 VDuzpwIvgc 
	areaName:	 oXNSfdQGtlDkOLyR 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class NamedArea
⠏ |         0 | Testing class Organization      <Organization>
Fields:
	agentText:	 rJSmifIBlHaxGUezNo 
	name:	 CBiQvOqbYxHm 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class Organization
⠏ |         0 | Testing class Path              <Path>
Fields:
	purePath:	 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class Path
⠏ |         0 | Testing class Person            <Person>
Fields:
	agentText:	 HYaA 
	fullName:	 YIFWPejKm 
	organization:	object of class <Organization> 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class Person
⠏ |         0 | Testing class Point             <Point>
Fields:
	crs:	object of class <Crs> 
	bbox:	list of length 6 
	coordinates:	object of class <LngLatAlt> 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class Point
⠏ |         0 | Testing class Polygon           <Polygon>
Fields:
	crs:	object of class <Crs> 
	bbox:	list of length 7 
	coordinates:	list of length 5 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class Polygon
⠏ |         0 | Testing class QueryCondition    <QueryCondition>
Fields:
	not:	 ALPsrFwKpSkRWNIfV 
	field:	 
	operator:	 mGMZDcwJ 
	value:	 
	and:	list of length 3 
	or:	list of length 1 
	constantScore:	 FALSE 
	boost:	 0.6598 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class QueryCondition
⠏ |         0 | Testing class QueryResult       <QueryResult>
Fields:
	totalSize:	 0.1027 
	resultSet:	list of length 2 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class QueryResult
⠏ |         0 | Testing class QueryResultItem   <QueryResultItem>
Fields:
	score:	 0.6715 
	item:	 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class QueryResultItem
⠏ |         0 | Testing class QueryResultItemObject<QueryResultItemObject>
Fields:
	score:	 0.4695 
	item:	 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class QueryResultItemObject
βœ“ |         2 | Testing miscellaneous QuerySpec properties [0.3s]
⠏ |         0 | Testing class QuerySpec         <QuerySpec>
Fields:
	constantScore:	 FALSE 
	fields:	list of length 7 
	conditions:	list of length 4 
	logicalOperator:	 wYauXPsOxcvdAqyZRfSg 
	sortFields:	list of length 9 
	from:	 10 
	size:	 10 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class QuerySpec
⠏ |         0 | Testing class Reference         <Reference>
Fields:
	titleCitation:	 eFmrzyRILtuM 
	citationDetail:	 zEeFVwaGpDXWiZMoYuHL 
	uri:	 LVBi 
	author:	object of class <Person> 
	publicationDate:	 1798-03-09 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class Reference
⠏ |         0 | Testing class RestService       <RestService>
Fields:
	endPoint:	 PUevoZrDiJAI 
	method:	 uXCvraspJingfEOeNxz 
	consumes:	 IGnCKTFJxlAYSyNaws 
	produces:	 pUmrwNeduoFO 
	url:	 FvKPCYEHQR 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class RestService
⠏ |         0 | Testing class ScientificName    <ScientificName>
Fields:
	fullScientificName:	 QzPhdmINeESbxpv 
	taxonomicStatus:	 azB 
	genusOrMonomial:	 kqYLXh 
	subgenus:	 wLmBNuRhHrljWg 
	specificEpithet:	 QTP 
	infraspecificEpithet:	 hnucDZJbxGCa 
	infraspecificMarker:	 BJuViFHNPrdR 
	nameAddendum:	 pBbwyEDmHcuQrx 
	authorshipVerbatim:	 U 
	author:	 PBNnyMC 
	year:	 wsUoNxkVzdfcyJX 
	scientificNameGroup:	 LeWJgAC 
	references:	list of length 8 
	experts:	list of length 4 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class ScientificName
⠏ |         0 | Testing class ServiceAccessPoint<ServiceAccessPoint>
Fields:
	accessUri:	 bWLoUrHG 
	format:	 GvMstYiulNA 
	variant:	 cLQFgJjxOolvYbqK 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class ServiceAccessPoint
⠏ |         0 | Testing class SortField         <SortField>
Fields:
	path:	 
	sortOrder:	 fbwovYPBKgpyZsV 
	ascending:	 FALSE 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class SortField
⠏ |         0 | Testing class SourceSystem      <SourceSystem>
Fields:
	code:	 Jd 
	name:	 UVNvhIZfpSoGqaygC 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class SourceSystem
⠏ |         0 | Testing class Specimen          <Specimen>
Fields:
	sourceSystem:	object of class <SourceSystem> 
	sourceSystemId:	 gZRbf 
	recordURI:	 uhz 
	id:	 LqRDOewvlmrPJsVHNY 
	unitID:	 TXZYyrcRUeLoVpqDJP 
	unitGUID:	 hMKafX 
	collectorsFieldNumber:	 vQRWoIOtM 
	assemblageID:	 KzEFmLBycCUfOHIGPhDt 
	sourceInstitutionID:	 gRAfdhFLSyuTExPHtmG 
	sourceID:	 RmZBJtOvKurVsTySiP 
	previousSourceID:	list of length 9 
	owner:	 jADBP 
	licenseType:	 FLzdjlCGOnqrQWaXbS 
	license:	 EmHjZVSkpIK 
	recordBasis:	 Oc 
	kindOfUnit:	 iEKmdsMNbh 
	collectionType:	 dQNvXGrioPtnIUuOg 
	sex:	 pCdGW 
	phaseOrStage:	 EkcHVMmexIYgtUjsyGNK 
	title:	 pwfJE 
	notes:	 jqmuyzF 
	preparationType:	 WBHQNUokZFCX 
	previousUnitsText:	 qkzITOlRUJF 
	numberOfSpecimen:	 7 
	fromCaptivity:	 TRUE 
	objectPublic:	 TRUE 
	multiMediaPublic:	 TRUE 
	acquiredFrom:	object of class <Agent> 
	gatheringEvent:	object of class <GatheringEvent> 
	identifications:	list of length 3 
	associatedMultiMediaUris:	list of length 7 
	theme:	list of length 7 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class Specimen
  |======================================================================| 100%
  |======================================================================| 100%
  |======================================================================| 100%
βœ“ |         5 | Testing dwca related functions [1.1s]
βœ“ |        26 | Testing specimen find functions [1.0s]
βœ“ |        11 | Testing specimen metadata endpoints [0.6s]
βœ“ |   2 2 279 | Testing miscellaneous specimen endpoints [284.8s]
────────────────────────────────────────────────
Skip (test-specimenClient-misc.R:56:3): download endpoint works
Reason: ndjson not supperoted yet, see issue #51

Warning (test-specimenClient-misc.R:88:3): getIdsInCollection works
javax.ws.rs.NotFoundException: RESTEASY003210: Could not find resource for full path: http://api.biodiversitydata.nl/v2/specimen/getIdsInCollection/siebold
Backtrace:
 1. sc$get_ids_in_collection("siebold") test-specimenClient-misc.R:88:2
 2. self$handleError(response) /home/maelle/Documents/ropensci/nbaR/R/SpecimenClient.r:970:8

Warning (test-specimenClient-misc.R:94:3): getNamedCollections works
javax.ws.rs.NotFoundException: RESTEASY003210: Could not find resource for full path: http://api.biodiversitydata.nl/v2/specimen/getNamedCollections
Backtrace:
 1. sc$get_named_collections() test-specimenClient-misc.R:94:2
 2. self$handleError(response) /home/maelle/Documents/ropensci/nbaR/R/SpecimenClient.r:993:8

Skip (test-specimenClient-misc.R:132:3): countDistinctValuesPerGroup works
Reason: Still unclear which datatype to return, see issue #43
────────────────────────────────────────────────
x | 1      30 | Testing query function [3.6s]   
────────────────────────────────────────────────
Failure (test-specimenClient-query.R:145:3): Errors and warnings work
res$response$status_code not equal to 500.
1/1 mismatches
[1] 400 - 500 == -100
────────────────────────────────────────────────
  |======================================================================| 100%
  |======================================================================| 100%
  |======================================================================| 100%
βœ“ |   2 2 317 | Testing wrapper functions for specimen client [32.1s]
────────────────────────────────────────────────
Skip (test-specimenClient-wrapper.R:57:3): specimen_download_query works
Reason: ndjson not supperoted yet, see issue #51

Warning (test-specimenClient-wrapper.R:186:3): specimen_get_ids_in_collection works
javax.ws.rs.NotFoundException: RESTEASY003210: Could not find resource for full path: http://api.biodiversitydata.nl/v2/specimen/getIdsInCollection/siebold
Backtrace:
 1. nbaR::specimen_get_ids_in_collection("siebold") test-specimenClient-wrapper.R:186:2
 2. sc$get_ids_in_collection(name, ...) /home/maelle/Documents/ropensci/nbaR/R/SpecimenClient-wrapper.r:388:2
 3. self$handleError(response) /home/maelle/Documents/ropensci/nbaR/R/SpecimenClient.r:970:8

Warning (test-specimenClient-wrapper.R:192:3): getNamedCollections works
javax.ws.rs.NotFoundException: RESTEASY003210: Could not find resource for full path: http://api.biodiversitydata.nl/v2/specimen/getNamedCollections
Backtrace:
 1. nbaR::specimen_get_named_collections() test-specimenClient-wrapper.R:192:2
 2. sc$get_named_collections(...) /home/maelle/Documents/ropensci/nbaR/R/SpecimenClient-wrapper.r:410:2
 3. self$handleError(response) /home/maelle/Documents/ropensci/nbaR/R/SpecimenClient.r:993:8

Skip (test-specimenClient-wrapper.R:211:1): specimen_group_by_scientific_name works
Reason: empty test
────────────────────────────────────────────────
βœ“ |         2 | specimenClient                  
⠏ |         0 | Testing class SpecimenIdentification<SpecimenIdentification>
Fields:
	taxonRank:	 TSuYEiHZJjtNsw 
	scientificName:	object of class <ScientificName> 
	typeStatus:	 wGUOAInYiyjblsDe 
	dateIdentified:	 1933-01-04 
	defaultClassification:	object of class <DefaultClassification> 
	systemClassification:	list of length 5 
	vernacularNames:	list of length 5 
	identificationQualifiers:	list of length 9 
	identifiers:	list of length 3 
	taxonomicEnrichments:	list of length 2 
	preferred:	 TRUE 
	verificationStatus:	 PUevoZrDiJAI 
	rockType:	 uXCvraspJingfEOeNxz 
	associatedFossilAssemblage:	 IGnCKTFJxlAYSyNaws 
	rockMineralUsage:	 pUmrwNeduoFO 
	associatedMineralName:	 FvKPCYEHQR 
	remarks:	 QzPhdmINeESbxpv 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class SpecimenIdentification
⠏ |         0 | Testing class SummaryScientificName<SummaryScientificName>
Fields:
	fullScientificName:	 azB 
	taxonomicStatus:	 kqYLXh 
	genusOrMonomial:	 wLmBNuRhHrljWg 
	subgenus:	 QTP 
	specificEpithet:	 hnucDZJbxGCa 
	infraspecificEpithet:	 BJuViFHNPrdR 
	authorshipVerbatim:	 pBbwyEDmHcuQrx 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class SummaryScientificName
⠏ |         0 | Testing class SummarySourceSystem<SummarySourceSystem>
Fields:
	code:	 U 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class SummarySourceSystem
⠏ |         0 | Testing class SummaryVernacularName<SummaryVernacularName>
Fields:
	name:	 PBNnyMC 
	language:	 wsUoNxkVzdfcyJX 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class SummaryVernacularName
⠏ |         0 | Testing class Taxon             <Taxon>
Fields:
	sourceSystem:	object of class <SourceSystem> 
	sourceSystemId:	 LeWJgAC 
	recordURI:	 TUHbWLoy 
	id:	 HGqyvMsYitlN 
	sourceSystemParentId:	 v 
	taxonRank:	 QxFgJjzOolwY 
	taxonRemarks:	 K 
	occurrenceStatusVerbatim:	 fbwovYPBKgpyZsV 
	acceptedName:	object of class <ScientificName> 
	defaultClassification:	object of class <DefaultClassification> 
	systemClassification:	list of length 2 
	synonyms:	list of length 5 
	vernacularNames:	list of length 10 
	descriptions:	list of length 1 
	references:	list of length 5 
	experts:	list of length 6 
	validName:	object of class <ScientificName> 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class Taxon
  |======================================================================| 100%
  |======================================================================| 100%
  |======================================================================| 100%
βœ“ |         5 | Testing dwca related functions for taxon objects [1.4s]
βœ“ |        10 | Testing taxon find functions [0.5s]
βœ“ |        11 | Testing TaxonClient metadata endpoints [0.6s]
βœ“ |       117 | Testing miscellaneous TaxonClient endpoints [26.4s]
x | 1      26 | Testing query function [2.0s]   
────────────────────────────────────────────────
Failure (test-taxonClient-query.R:70:3): Errors and warnings work
res$response$status_code not equal to 500.
1/1 mismatches
[1] 400 - 500 == -100
────────────────────────────────────────────────
βœ“ |         2 | taxonClient                     
⠏ |         0 | Testing class TaxonDescription  <TaxonDescription>
Fields:
	category:	 TSuYEiHZJjtNsw 
	description:	 wGUOAInYiyjblsDe 
	language:	 dEkFjo 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class TaxonDescription
⠏ |         0 | Testing class TaxonomicEnrichment<TaxonomicEnrichment>
Fields:
	vernacularNames:	list of length 10 
	synonyms:	list of length 2 
	sourceSystem:	object of class <SummarySourceSystem> 
	taxonId:	 ApPymDYaXxOsc 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class TaxonomicEnrichment
⠏ |         0 | Testing class VernacularName    <VernacularName>
Fields:
	name:	 c 
	language:	 ZRfSgYabsK 
	preferred:	 TRUE 
	references:	list of length 6 
	experts:	list of length 7 
Methods:
	fromJSONString
	toJSONString
	fromList
	toList
	print
βœ“ |        11 | Testing class VernacularName

══ Results ═════════════════════════════════════
Duration: 476.4 s

── Skipped tests  ──────────────────────────────
β€’ empty test (3)
β€’ ndjson not supperoted yet, see issue #51 (2)
β€’ Still unclear which datatype to return, see issue #43 (1)

[ FAIL 2 | WARN 7 | SKIP 6 | PASS 1745 ]

Happy to help fixing if needed.
You might be interested in https://books.ropensci.org/http-testing/ if you want to cache some API responses.
@maelle maelle mentioned this issue Dec 17, 2021
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@maelle
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maelle commented Jan 20, 2022

πŸ‘‹ @hettling @rvosa Friendly reminder 😸

Happy to help if needed.

@maelle maelle mentioned this issue Feb 14, 2022
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@maelle maelle mentioned this issue Oct 3, 2022
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maelle commented Nov 7, 2022

@KevCaz is any help needed?

@maelle
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maelle commented Jan 5, 2023

@KevCaz Happy New Year! Is any help needed?

@maelle
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maelle commented Sep 5, 2023

@KevCaz any update? I also see a vignette failure via https://ropensci.r-universe.dev/builds

@maelle maelle closed this as completed Nov 7, 2023
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