Create codecov.yaml #1
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name: R Package CI | |
#on: | |
# push: | |
# branches: | |
# - main | |
# pull_request: | |
# branches: | |
# - main | |
jobs: | |
build: | |
runs-on: ubuntu-latest | |
steps: | |
- name: Checkout code | |
uses: actions/checkout@v2 | |
- name: Set up R | |
uses: r-lib/actions/setup-r@v2 | |
with: | |
r-version: 4.1 # You can change this to the R version you need | |
- name: Cache C++ and R dependencies | |
uses: actions/cache@v2 | |
with: | |
path: | | |
~/.cache/R | |
~/.local/share/R | |
key: dependencies-${{ runner.os }}-${{ hashFiles('**/DESCRIPTION') }} | |
restore-keys: | | |
dependencies-${{ runner.os }}- | |
- name: Install system dependencies | |
run: | | |
sudo apt-get update | |
sudo apt-get install -y libudunits2-dev libgdal-dev | |
- name: Install dependencies | |
run: | | |
R -e 'install.packages("remotes")' | |
R -e 'remotes::install_deps()' | |
- name: Install dependencies for covr and testthat | |
run: R -e 'install.packages(c("covr", "testthat"), dependencies = TRUE)' | |
- name: Run tests and calculate coverage | |
run: | | |
echo "Current working directory: $(pwd)" | |
R -e 'library(covr); covr::package_coverage(coverage_file = "coverage.xml")' | |
- name: Upload coverage to Codecov | |
uses: codecov/codecov-action@v3 | |
with: | |
token: ${{ secrets.CODECOV_TOKEN }} | |
coverage_reports: ${{ github.workspace }}/coverage.xml | |
- name: Cleanup | |
run: | | |
R -e 'remove.packages("remotes")' |