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Can shiny server use the Conda environment R #559

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nolanjj opened this issue Oct 13, 2023 · 4 comments
Open

Can shiny server use the Conda environment R #559

nolanjj opened this issue Oct 13, 2023 · 4 comments

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@nolanjj
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nolanjj commented Oct 13, 2023

How to do that。I want to use R in the Conda environment,so that it is easier to install the R package。

@philibe
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philibe commented Oct 13, 2023

I never tried.

It seems to exist : https://anaconda.org/r/r-shiny

version 1.71 for arch, 1.0 and 1.1,for others
Last upload: 1 year and 3 months ago

also
https://community.anaconda.cloud/t/using-shiny-server-in-an-anaconda-r-env/24992/5

@nolanjj
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nolanjj commented Oct 13, 2023

I never tried.

It seems to exist : https://anaconda.org/r/r-shiny

version 1.71 for arch, 1.0 and 1.1,for others
Last upload: 1 year and 3 months ago

also https://community.anaconda.cloud/t/using-shiny-server-in-an-anaconda-r-env/24992/5

Thank you! I'm still confused that how to use conda's R when shiny server is start. like rstudio server ,I can run sudo rstudio-server restart --rsession-which-r=/home/junjie/miniconda3/envs/bio/bin/R to use conda's R.

@toxintoxin
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maybe add the specific env to the system global environment path?

@gernophil
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Are you planing to include support for conda envs in the future similar like the support of venv? That would be great, if I could simply tell shiny-server, which conda env to use for what app.

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4 participants