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Functions for nice tree decomposition and its labelling #4928

Functions for nice tree decomposition and its labelling

Functions for nice tree decomposition and its labelling #4928

Workflow file for this run

name: Build & Test using Conda
on:
push:
tags:
- '*'
branches:
- 'public/build/**-runci'
pull_request:
workflow_dispatch:
# Allow to run manually
concurrency:
# Cancel previous runs of this workflow for the same branch
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
jobs:
test:
name: Conda
runs-on: ${{ matrix.os }}
strategy:
fail-fast: ${{ github.event_name == 'pull_request' }}
max-parallel: ${{ github.event_name == 'pull_request' && 2 || 6 }}
matrix:
os: [ubuntu-latest, macos-latest]
python: ['3.9', '3.10', '3.11']
# Optional environment is disabled for now as its not yet working
# environment: [environment, environment-optional]
conda-env: [environment]
steps:
- uses: actions/checkout@v4
- name: Merge CI fixes from sagemath/sage
run: |
.ci/merge-fixes.sh
env:
GH_TOKEN: ${{ github.token }}
- name: Create conda environment files
run: ./bootstrap-conda
- name: Cache conda packages
uses: actions/cache@v3
with:
path: ~/conda_pkgs_dir
key:
${{ runner.os }}-conda-${{ hashFiles('src/environment-3.11.yml') }}
- name: Setup Conda environment
uses: conda-incubator/setup-miniconda@v2
with:
python-version: ${{ matrix.python }}
miniforge-version: latest
use-mamba: true
channels: conda-forge
channel-priority: true
activate-environment: sage
environment-file: src/${{ matrix.conda-env }}-${{ matrix.python }}.yml
- name: Print Conda environment
shell: bash -l {0}
run: |
conda info
conda list
- name: Configure
shell: bash -l {0}
continue-on-error: true
run: |
./bootstrap
echo "::add-matcher::.github/workflows/configure-systempackage-problem-matcher.json"
./configure --enable-build-as-root --with-python=$CONDA_PREFIX/bin/python --prefix=$CONDA_PREFIX --enable-system-site-packages $(for pkg in $(./sage -package list :standard: --has-file spkg-configure.m4 --has-file distros/conda.txt --exclude rpy2); do echo --with-system-$pkg=force; done)
echo "::remove-matcher owner=configure-system-package-warning::"
echo "::remove-matcher owner=configure-system-package-error::"
- name: Build
shell: bash -l {0}
run: |
# Use --no-deps and pip check below to verify that all necessary dependencies are installed via conda.
pip install --no-build-isolation --no-deps -v -v -e ./pkgs/sage-conf ./pkgs/sage-setup
pip install --no-build-isolation --no-deps --config-settings editable_mode=compat -v -v -e ./src
env:
SAGE_NUM_THREADS: 2
- name: Verify dependencies
if: success() || failure()
shell: bash -l {0}
run: pip check
- name: Test
if: success() || failure()
shell: bash -l {0}
run: ./sage -t --all -p0
- name: Print logs
if: always()
run: |
for file in $(find . -type f -name "*.log"); do
echo "::group::$file"
cat "$file"
echo "::endgroup::"
done