Changes from Aidan Delaney #99
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- these are deps of the Python wrapper, not libgubbins.so.
- SCP likes to check the host key of our temporay VM, and won't
connect if it has seen localhost:2222 before (which it probably
has).
- Use @PACKAGE_*@ autoconf vars - generate some debian/* files
since standard-raxml will be built if it is not found. Also, some HPC facilities have customised builds of RaXML so it is not ideal to make the binary package a strict dependency.
Made RaXML a recommended package, not a dependency,
- the RaXML build uses the Makefile.generic which is the same as what is used by the Debian/Ubuntu packages. - fastml is now packaged in PPA for Ubuntu saucy, we'll expand this coverage later.
…e as .deb packages.
… python bindings such that they no longer use them.
…" 99 char length.
…n the previously bundled versions.
Conflicts: README.md install-userspace.sh
Packaging changes
fastml 2 gives slightly different results to fastml3 This reverts commit 0f590c5.
andrewjpage
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Aug 12, 2014
Changes from Aidan Delaney
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