DESCRIPTION

Package: cecelia
Type: Package
Title: Framework for image and flow cytometry analysis
Version: 0.01
Date: 2022-07-13
Authors@R: c(
  person(
    "Dominik", "Schienstock", email = "schienstockd@student.unimelb.edu.au",
    role = c("cre", "aut"), comment = c(ORCID = "0000-0001-8440-0009")))
Author: Dominik Schienstock
Maintainer: Dominik Schienstock <schienstockd@student.unimelb.edu.au>
Description: Set of core functions that are used to produce a shiny app for immunological image and flow cytometry analysis.
License: GPL (>= 3)
biocViews:
Imports:
    Rcpp (>= 1.0.8),
    data.table (>= 1.14.2),
    config (>= 0.3.1),
    shiny (>= 1.7.2),
    ggplot2,
    reticulate,
    memoise,
    httpuv,
    tools,
    xfun,
    interp,
    BiocManager,
    stringr,
    stringi,
    jsonlite,
    optparse,
    DBI,
    DT,
    readr,
    xml2,
    config,
    caTools,
    celltrackR,
    dbscan,
    pkgconfig,
    assertthat,
    gtable,
    scales,
    munsell,
    fs,
    RcppParallel,
    deldir,
    XML,
    MASS,
    R.utils,
    R.methodsS3,
    R.oo,
    clue,
    cluster,
    corpcor,
    ellipse,
    mnormt,
    IDPmisc,
    KernSmooth,
    hexbin,
    rrcov,
    mvtnorm,
    robustbase,
    DEoptimR,
    pcaPP,
    ks,
    pracma,
    RcppArmadillo,
    BH,
    spatstat,
    RSQLite,
    remotes,
    randomcoloR,
    purrr,
    ggpubr,
    DescTools,
    depmixS4,
    ggrepel,
    geometry,
    lubridate,
    ggquiver,
    concaveman
LinkingTo: Rcpp
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
Encoding: UTF-8
URL: https://github.com/schienstockd/cecelia
BugReports: https://github.com/schienstockd/cecelia/issues
Suggests: 
    testthat (>= 3.0.0)
Config/testthat/edition: 3