release #55
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| name: release | |
| # based off of https://github.com/astral-sh/ruff/blob/main/.github/workflows/release.yaml | |
| on: | |
| workflow_dispatch: | |
| inputs: | |
| tag: | |
| description: "The version to tag (without the leading 'v'). If omitted, will initiate a dry run (no uploads)." | |
| default: "" | |
| type: string | |
| branch: | |
| description: "The branch from which to release." | |
| type: string | |
| prerelease: | |
| description: "Whether the release is a pre-release." | |
| default: false | |
| type: boolean | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| validate-tag: | |
| name: Validate tag | |
| runs-on: ubuntu-latest | |
| # If you don't set an input tag, it's a dry run (no uploads). | |
| if: ${{ inputs.tag }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| ref: ${{ inputs.branch }} | |
| - name: Check tag consistency | |
| run: | | |
| # Switch to the commit we want to release | |
| git checkout ${{ inputs.branch }} | |
| version=$(grep "^version = " pyproject.toml | sed -e 's/version = "\(.*\)"/\1/g') | |
| if [ "${{ inputs.tag }}" != "${version}" ]; then | |
| echo "The input tag does not match the version from pyproject.toml:" >&2 | |
| echo "${{ inputs.tag }}" >&2 | |
| echo "${version}" >&2 | |
| exit 1 | |
| else | |
| echo "Releasing ${version}" | |
| fi | |
| tag-release: | |
| name: Tag release | |
| runs-on: ubuntu-latest | |
| needs: validate-tag | |
| # If you don't set an input tag, it's a dry run (no uploads). | |
| if: ${{ inputs.tag }} | |
| permissions: | |
| # For git tag | |
| contents: write | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| ref: ${{ inputs.branch }} | |
| - name: git tag | |
| run: | | |
| git config --global user.email "martin.kim@scverse.org" | |
| git config --global user.name "scvi-tools release" | |
| git tag -m "${{ inputs.tag }}" "${{ inputs.tag }}" | |
| # If there is duplicate tag, this will fail. The publish to pypi action will have been a noop (due to skip | |
| # existing), so we make a non-destructive exit here | |
| git push --tags | |
| publish-release: | |
| name: Publish to GitHub | |
| runs-on: ubuntu-latest | |
| needs: tag-release | |
| # If you don't set an input tag, it's a dry run (no uploads). | |
| if: ${{ inputs.tag }} | |
| permissions: | |
| # For GitHub release publishing | |
| contents: write | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| ref: ${{ inputs.branch }} | |
| - uses: softprops/action-gh-release@v2 | |
| with: | |
| name: scvi-tools ${{ inputs.tag }} | |
| tag_name: ${{ inputs.tag }} | |
| generate_release_notes: false | |
| body_path: .github/workflows/release_notes.md | |
| prerelease: ${{ inputs.prerelease }} | |
| target_commitish: ${{ inputs.branch }} | |
| upload-release: | |
| runs-on: ubuntu-latest | |
| needs: tag-release | |
| environment: | |
| name: pypi | |
| url: https://pypi.org/p/scvi-tools | |
| permissions: | |
| id-token: write # IMPORTANT: this permission is mandatory for trusted publishing | |
| # If you don't set an input tag, it's a dry run (no uploads). | |
| if: ${{ inputs.tag }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| filter: blob:none | |
| fetch-depth: 0 | |
| ref: ${{ inputs.branch }} | |
| - uses: actions/setup-python@v4 | |
| with: | |
| python-version: "3.11" | |
| - run: pip install build | |
| - run: python -m build | |
| - uses: pypa/gh-action-pypi-publish@release/v1 | |
| build-image: | |
| runs-on: ubuntu-latest | |
| needs: tag-release | |
| permissions: | |
| contents: read | |
| packages: write | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| dependencies: ["", "dev", "tutorials"] | |
| # If you don't set an input tag, it's a dry run (no uploads). | |
| if: ${{ inputs.tag }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| filter: blob:none | |
| fetch-depth: 0 | |
| ref: ${{ inputs.branch }} | |
| - uses: docker/setup-buildx-action@v3 | |
| - uses: docker/login-action@v3 | |
| with: | |
| registry: ghcr.io | |
| username: ${{ github.actor }} | |
| password: ${{ secrets.GITHUB_TOKEN }} | |
| - uses: docker/build-push-action@v5 | |
| with: | |
| context: . | |
| file: ./Dockerfile | |
| push: true | |
| cache-from: type=registry,ref=ghcr.io/scverse/scvi-tools:buildcache | |
| cache-to: type=inline,ref=ghcr.io/scverse/scvi-tools:buildcache | |
| target: build | |
| tags: ghcr.io/scverse/scvi-tools:py3.11-cu12-${{ inputs.tag }}-${{ matrix.dependencies }},ghcr.io/scverse/scvi-tools:py3.11-cu12-stable-${{ matrix.dependencies }} | |
| build-args: | | |
| DEPENDENCIES=${{ matrix.dependencies }} |