Can not import Squidpy into Jupiter notebook. Help needed

[yingsun-ucsd]

I am not sure if it’s a good place to ask such a basic question about Squidpy, but I got stuck for quite a while. I can use Squidpy in Python without any problems, but had trouble importing it into jupyter notebook. I attached the error message I got. Any suggestions will be appreciated. Thanks a lot!
...
spatialPancreas_Squidpy - Jupyter Notebook.pdf

[michalk8]

Hi @yingsun-ucsd , based on this, you need to upgrade to numpy>=1.20.0.

[yingsun-ucsd]

Thanks @michalk8. But I think I have that already:
scanpy==1.8.1 anndata==0.7.6 umap==0.5.1 numpy==1.22.4 scipy==1.9.1 pandas==1.5.3 scikit-learn==1.0 statsmodels==0.13.0rc0 python-igraph==0.9.6 pynndescent==0.5.4

[aandytu]

if you're mixing conda and pip installed packages, it might help to re-install numpy with

pip install --upgrade --force-reinstall numpy==1.22.4

[yingsun-ucsd]

Thank you @aandytu

I don't know how this happed but it seems that I can import squidpy now but got some other error message. I will open another issues topic. Thanks again.