nf-core-fetchngs.json

{
  "description": "Pipeline to fetch metadata and raw FastQ files from public and private databases\n\n",
  "launch": {
    "pipeline": "https://github.com/nf-core/fetchngs",
    "revision": "1.10.1",
    "configProfiles": [
      "test"
    ],
    "userSecrets": [],
    "workspaceSecrets": [],
    "configText": "",
    "paramsText": "outdir: 's3://seqeralabs-showcase/nf-core-fetchngs/results'\nforce_sratools_download: true\nnf_core_pipeline: 'rnaseq'",
    "preRunScript": "yum install jq -y\nexport NXF_VER=$(curl -s https://api.github.com/repos/nextflow-io/nextflow/tags | jq -r '.[].name' | head -n 1 | cut -c2-)",
    "resume": false,
    "pullLatest": false,
    "stubRun": false
  }
}