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apptainer CI / singularity issue #13

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cokelaer opened this issue Feb 6, 2023 · 0 comments
Open

apptainer CI / singularity issue #13

cokelaer opened this issue Feb 6, 2023 · 0 comments
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@cokelaer
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cokelaer commented Feb 6, 2023

Wierd error in CI action.
Singularity does not seem to work for spades/digital-normaliastion

First type of errors:

 while extracting 866bf0d2f8f9f5cd879ea6cc4bcc4d20.simg: root filesystem extraction failed: failed to copy 
content in staging file: write /tmp/rootfs-843128271/archive-765418722: no space left on device

Second is bash missing. Yet the sequana_tools singularity works for other pipelines
@cokelaer cokelaer added the bug Something isn't working label Feb 6, 2023
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@cokelaer