From dab3a455049367fab0a72232fcfc5f85f9a213a8 Mon Sep 17 00:00:00 2001
From: Dominik <dotto@fredhutch.org>
Date: Thu, 20 Jun 2024 23:11:05 -0700
Subject: [PATCH] remove `numpy` as direct dependency

---
 CHANGELOG.md   | 4 ++++
 mellon/util.py | 3 ++-
 setup.py       | 1 -
 3 files changed, 6 insertions(+), 2 deletions(-)

diff --git a/CHANGELOG.md b/CHANGELOG.md
index 90185bd..5ecfaac 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -1,3 +1,7 @@
+# v1.4.4rc
+
+ - remove `numpy` as direct dependency
+
 # v1.4.3
 
  - Detailed logging about invalid `nn_distances`.
diff --git a/mellon/util.py b/mellon/util.py
index 5a4ebff..e728eb5 100644
--- a/mellon/util.py
+++ b/mellon/util.py
@@ -31,8 +31,9 @@
     vstack,
     index_exp,
     broadcast_to,
+    integer,
+    floating,
 )
-from numpy import integer, floating
 from jax.numpy import sum as arraysum
 from jax.numpy import diag as diagonal
 from jax.numpy.linalg import norm, lstsq, matrix_rank
diff --git a/setup.py b/setup.py
index 212c45c..4c1c94a 100644
--- a/setup.py
+++ b/setup.py
@@ -27,7 +27,6 @@ def get_version(rel_path):
     install_requires=[
         "jax",
         "jaxopt",
-        "numpy",
         "scikit-learn",
     ],
     extras_require={