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INSTALLATION ⚙️

◀️ Home | ◀️ Documentation

The installation procedure is the same for all platforms. The main requirement is Python 3.11. The recommended way to install is using pip:

Install from PyPI

pip install gene-connector-cli

If you already have a previous version installed, you can upgrade using:

pip install --upgrade --force-reinstall gene-connector-cli

Install from source

git clone https://github.com/sgelias/gene-connector-cli.git
cd gene-connector-cli
pip install .

Install from source (editable)

pip install -e .

Check installation and version

Gene Connector CLI is a command line interface (CLI) tool, them main command being gcon, available after installation. See usage guide for details.

gcon --help
gcon --version

Uninstall

pip uninstall gene-connector-cli

⚠️ IMPORTANT: If your environment contains more than one python version installed, you include python3.11 -m before pip in the above commands. Example:

python3.11 -m pip install gene-connector-cli

▶️ Next: Usage