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MeSH terms for protein families incorrectly output by PybelProcessor #1324

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cthoyt opened this issue Aug 17, 2021 · 1 comment
Open

MeSH terms for protein families incorrectly output by PybelProcessor #1324

cthoyt opened this issue Aug 17, 2021 · 1 comment

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@cthoyt
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cthoyt commented Aug 17, 2021

Example from EMMAA covid model:

WARNING: [2021-08-17 14:29:41] indra.assemblers.pybel.assembler - Node should not have variants: bp(MESH:D019895 ! Transposases), [{'kind': 'hgvs', 'hgvs': 'p.?'}]

@bgyori
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bgyori commented Aug 18, 2021

Do you have the specific statement where this happened? I'm not sure where the statement about Transposases with a variant would come from, can't find it.

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