From 9071b1e5cd9e22468e9d9a9af5860cbc10314f4f Mon Sep 17 00:00:00 2001 From: "C. Titus Brown" Date: Sun, 18 Feb 2018 10:55:45 -0800 Subject: [PATCH] fix reST in updated docs (#403) --- doc/index.rst | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/doc/index.rst b/doc/index.rst index 3105ae463e..2f3e201ef9 100644 --- a/doc/index.rst +++ b/doc/index.rst @@ -86,16 +86,16 @@ sourmash has relatively small disk and memory requirements compared to many other software programs used for genome search and taxonomic classification. -First, `mash` beats sourmash in speed and memory, so if you can use mash, +First, ``mash`` beats sourmash in speed and memory, so if you can use mash, more power to you :) -`sourmash search` and `sourmash gather` can be used to search all -genbank microbial genomes ([using our prepared -databases](databases.html)) with about 20 GB of disk and in under 1 GB +``sourmash search`` and ``sourmash gather`` can be used to search all +genbank microbial genomes (`using our prepared +databases `__) with about 20 GB of disk and in under 1 GB of RAM. Typically a search for a single genome takes about 30 seconds on a laptop. -`sourmash lca` can be used to search/classify against all genbank +``sourmash lca`` can be used to search/classify against all genbank microbial genomes with about 200 MB of disk space and about 10 GB of RAM. Typically a metagenome classification takes about 1 minute on a laptop.