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adjust screed to allow replacement of stdin input #1348

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ctb opened this issue Feb 25, 2021 · 0 comments
Open

adjust screed to allow replacement of stdin input #1348

ctb opened this issue Feb 25, 2021 · 0 comments

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@ctb
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ctb commented Feb 25, 2021

When working on #1347, I discovered that it was impossible to feed sequences into screed via mocking stdin with io.StringIO. We should fix that so that we can test streaming into sourmash sketch.

It looks like the problem is that screed opens /dev/stdin directly when - is surprised.
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