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dumping this so it's findable
https://gist.github.com/taylorreiter/50c55359393bf2bd91a07953d6e2f9c8
The text was updated successfully, but these errors were encountered:
code updated to run with Rscript nicely here - https://github.com/ctb/2022-may-cfde-demo/blob/main/sourmash_gather_to_metacoder_plot.R
Rscript
walkthrough of doing gather + plot with an iHMP sample, here - https://github.com/ctb/2022-may-cfde-demo/blob/main/demo-walkthrough.ipynb
full install instructions here - https://github.com/ctb/2022-may-cfde-demo/blob/main/INSTALL.md
for a conda install of the relevant R packages, you need: r-dplyr r-metacoder r-readr
r-dplyr r-metacoder r-readr
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tax grep
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dumping this so it's findable
https://gist.github.com/taylorreiter/50c55359393bf2bd91a07953d6e2f9c8
The text was updated successfully, but these errors were encountered: