From a02db13df1a009bec90367e9ff4fb7d9ea7de445 Mon Sep 17 00:00:00 2001 From: David Bitner Date: Fri, 23 Jul 2021 12:54:38 -0500 Subject: [PATCH 1/3] use poetry --- .github/workflows/release.yml | 12 +- Dockerfile | 32 ++- Dockerfile.dev | 25 ++- docker-compose.yml | 1 + pypgstac/poetry.lock | 412 +++++++++++++++++++++++++++++++--- pypgstac/pyproject.toml | 8 +- pypgstac/requirements-dev.txt | 3 - pypgstac/setup.py | 40 ---- scripts/cipublish | 5 +- 9 files changed, 441 insertions(+), 97 deletions(-) delete mode 100644 pypgstac/requirements-dev.txt delete mode 100644 pypgstac/setup.py diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml index 532ab81d..88d57fc6 100644 --- a/.github/workflows/release.yml +++ b/.github/workflows/release.yml @@ -20,11 +20,17 @@ jobs: - name: Install release dependencies run: | python -m pip install --upgrade pip - pip install setuptools wheel twine + pip install poetry==1.1.7 - name: Build and publish package env: - TWINE_USERNAME: ${{ secrets.PYPI_STACUTILS_USERNAME }} - TWINE_PASSWORD: ${{ secrets.PYPI_STACUTILS_PASSWORD }} + POETRY_HTTP_BASIC_PYPI_USERNAME: ${{ secrets.PYPI_STACUTILS_USERNAME }} + POETRY_HTTP_BASIC_PYPI_PASSWORD: ${{ secrets.PYPI_STACUTILS_PASSWORD }} run: | scripts/cipublish + + - name: Tag Release + uses: "marvinpinto/action-automatic-releases@v1.2.1" + with: + repo_token: "${{ secrets.GITHUB_TOKEN }}" + prerelease: false diff --git a/Dockerfile b/Dockerfile index c78915c4..4b902322 100644 --- a/Dockerfile +++ b/Dockerfile @@ -6,15 +6,22 @@ ENV POSTGIS_MAJOR 3 ENV PGUSER postgres ENV PGDATABASE postgres ENV PGHOST localhost +ENV \ + PYTHONUNBUFFERED=1 \ + PYTHONFAULTHANDLER=1 \ + PYTHONDONTWRITEBYTECODE=1 \ + PIP_NO_CACHE_DIR=off \ + PIP_DISABLE_PIP_VERSION_CHECK=on \ + PIP_DEFAULT_TIMEOUT=100 \ + POETRY_VIRTUALENVS_CREATE=false \ + POETRY_NO_INTERACTION=1 RUN \ apt-get update \ && apt-get install -y --no-install-recommends \ - # curl \ gnupg \ apt-transport-https \ debian-archive-keyring \ - # jq \ software-properties-common \ postgresql-$PG_MAJOR-pgtap \ postgresql-$PG_MAJOR-partman \ @@ -24,19 +31,30 @@ RUN \ python3 \ python3-pip \ python3-setuptools \ - # git \ && pip3 install -U pip setuptools packaging \ && pip3 install -U psycopg2-binary \ && pip3 install -U migra[pg] \ - && apt-get remove -y apt-transport-https software-properties-common build-essential python3-pip python3-dev python3-setuptools \ + && pip3 install poetry==1.1.7 \ + && apt-get remove -y apt-transport-https \ && apt-get -y autoremove \ && rm -rf /var/lib/apt/lists/* EXPOSE 5432 RUN mkdir -p /docker-entrypoint-initdb.d -# COPY ./docker/initpgstac.sh /docker-entrypoint-initdb.d/initpgstac.sh -# COPY ./pgstac.sql /workspaces/pgstac.sql COPY ./sql /docker-entrypoint-initdb.d/ -WORKDIR /workspaces +RUN mkdir -p /opt/src/pypgstac + +WORKDIR /opt/src/pypgstac + +COPY pypgstac/poetry.lock pypgstac/pyproject.toml ./ +RUN poetry install + + +COPY pypgstac /opt/src/pypgstac +RUN poetry install + +ENV PYTHONPATH=/opt/src/pypgstac:${PYTHONPATH} + +WORKDIR /opt/src diff --git a/Dockerfile.dev b/Dockerfile.dev index 9978c0ff..64334d46 100644 --- a/Dockerfile.dev +++ b/Dockerfile.dev @@ -1,17 +1,30 @@ -FROM python:3.8-slim +FROM python:3.8-slim as python-base -ENV CURL_CA_BUNDLE /etc/ssl/certs/ca-certificates.crt +ENV \ + PYTHONUNBUFFERED=1 \ + PYTHONFAULTHANDLER=1 \ + PYTHONDONTWRITEBYTECODE=1 \ + PIP_NO_CACHE_DIR=off \ + PIP_DISABLE_PIP_VERSION_CHECK=on \ + PIP_DEFAULT_TIMEOUT=100 \ + POETRY_VIRTUALENVS_CREATE=false \ + POETRY_NO_INTERACTION=1 + +RUN apt-get update && apt-get install -y git && rm -rf /var/lib/apt/lists/* + +RUN pip install poetry==1.1.7 RUN mkdir -p /opt/src/pypgstac WORKDIR /opt/src/pypgstac -COPY pypgstac/requirements-dev.txt /opt/src/pypgstac/requirements-dev.txt -RUN pip install -r requirements-dev.txt +COPY pypgstac/poetry.lock pypgstac/pyproject.toml ./ +RUN poetry install + COPY pypgstac /opt/src/pypgstac -RUN pip install . +RUN poetry install ENV PYTHONPATH=/opt/src/pypgstac:${PYTHONPATH} -WORKDIR /opt/src \ No newline at end of file +WORKDIR /opt/src diff --git a/docker-compose.yml b/docker-compose.yml index 92136d35..aee604cf 100644 --- a/docker-compose.yml +++ b/docker-compose.yml @@ -26,6 +26,7 @@ services: - POSTGRES_DB=postgis - PGUSER=username - PGPASSWORD=password + - PGHOST=localhost - PGDATABASE=postgis ports: - "5432:5432" diff --git a/pypgstac/poetry.lock b/pypgstac/poetry.lock index 3edf7097..69e30cf5 100644 --- a/pypgstac/poetry.lock +++ b/pypgstac/poetry.lock @@ -1,3 +1,11 @@ +[[package]] +name = "appdirs" +version = "1.4.4" +description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"." +category = "dev" +optional = false +python-versions = "*" + [[package]] name = "asyncio" version = "3.4.3" @@ -14,6 +22,9 @@ category = "main" optional = false python-versions = ">=3.5.0" +[package.dependencies] +typing-extensions = {version = ">=3.7.4.3", markers = "python_version < \"3.8\""} + [package.extras] dev = ["Cython (>=0.29.20,<0.30.0)", "pytest (>=3.6.0)", "Sphinx (>=1.7.3,<1.8.0)", "sphinxcontrib-asyncio (>=0.2.0,<0.3.0)", "sphinx-rtd-theme (>=0.2.4,<0.3.0)", "pycodestyle (>=2.5.0,<2.6.0)", "flake8 (>=3.7.9,<3.8.0)", "uvloop (>=0.14.0,<0.15.0)"] docs = ["Sphinx (>=1.7.3,<1.8.0)", "sphinxcontrib-asyncio (>=0.2.0,<0.3.0)", "sphinx-rtd-theme (>=0.2.4,<0.3.0)"] @@ -41,6 +52,30 @@ docs = ["furo", "sphinx", "zope.interface", "sphinx-notfound-page"] tests = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "mypy", "pytest-mypy-plugins", "zope.interface"] tests_no_zope = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "mypy", "pytest-mypy-plugins"] +[[package]] +name = "black" +version = "21.7b0" +description = "The uncompromising code formatter." +category = "dev" +optional = false +python-versions = ">=3.6.2" + +[package.dependencies] +appdirs = "*" +click = ">=7.1.2" +mypy-extensions = ">=0.4.3" +pathspec = ">=0.8.1,<1" +regex = ">=2020.1.8" +tomli = ">=0.2.6,<2.0.0" +typed-ast = {version = ">=1.4.2", markers = "python_version < \"3.8\""} +typing-extensions = {version = ">=3.7.4", markers = "python_version < \"3.8\""} + +[package.extras] +colorama = ["colorama (>=0.4.3)"] +d = ["aiohttp (>=3.6.0)", "aiohttp-cors (>=0.4.0)"] +python2 = ["typed-ast (>=1.4.2)"] +uvloop = ["uvloop (>=0.15.2)"] + [[package]] name = "click" version = "7.1.2" @@ -57,17 +92,82 @@ category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" +[[package]] +name = "flake8" +version = "3.9.2" +description = "the modular source code checker: pep8 pyflakes and co" +category = "dev" +optional = false +python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,>=2.7" + +[package.dependencies] +importlib-metadata = {version = "*", markers = "python_version < \"3.8\""} +mccabe = ">=0.6.0,<0.7.0" +pycodestyle = ">=2.7.0,<2.8.0" +pyflakes = ">=2.3.0,<2.4.0" + +[[package]] +name = "importlib-metadata" +version = "4.6.1" +description = "Read metadata from Python packages" +category = "dev" +optional = false +python-versions = ">=3.6" + +[package.dependencies] +typing-extensions = {version = ">=3.6.4", markers = "python_version < \"3.8\""} +zipp = ">=0.5" + +[package.extras] +docs = ["sphinx", "jaraco.packaging (>=8.2)", "rst.linker (>=1.9)"] +perf = ["ipython"] +testing = ["pytest (>=4.6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-cov", "pytest-enabler (>=1.0.1)", "packaging", "pep517", "pyfakefs", "flufl.flake8", "pytest-perf (>=0.9.2)", "pytest-black (>=0.3.7)", "pytest-mypy", "importlib-resources (>=1.3)"] + +[[package]] +name = "mccabe" +version = "0.6.1" +description = "McCabe checker, plugin for flake8" +category = "dev" +optional = false +python-versions = "*" + [[package]] name = "more-itertools" -version = "8.7.0" +version = "8.8.0" description = "More routines for operating on iterables, beyond itertools" category = "dev" optional = false python-versions = ">=3.5" +[[package]] +name = "mypy" +version = "0.910" +description = "Optional static typing for Python" +category = "dev" +optional = false +python-versions = ">=3.5" + +[package.dependencies] +mypy-extensions = ">=0.4.3,<0.5.0" +toml = "*" +typed-ast = {version = ">=1.4.0,<1.5.0", markers = "python_version < \"3.8\""} +typing-extensions = ">=3.7.4" + +[package.extras] +dmypy = ["psutil (>=4.0)"] +python2 = ["typed-ast (>=1.4.0,<1.5.0)"] + +[[package]] +name = "mypy-extensions" +version = "0.4.3" +description = "Experimental type system extensions for programs checked with the mypy typechecker." +category = "dev" +optional = false +python-versions = "*" + [[package]] name = "orjson" -version = "3.5.2" +version = "3.6.0" description = "Fast, correct Python JSON library supporting dataclasses, datetimes, and numpy" category = "main" optional = false @@ -75,15 +175,23 @@ python-versions = ">=3.6" [[package]] name = "packaging" -version = "20.9" +version = "21.0" description = "Core utilities for Python packages" category = "dev" optional = false -python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" +python-versions = ">=3.6" [package.dependencies] pyparsing = ">=2.0.2" +[[package]] +name = "pathspec" +version = "0.9.0" +description = "Utility library for gitignore style pattern matching of file paths." +category = "dev" +optional = false +python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,>=2.7" + [[package]] name = "pluggy" version = "0.13.1" @@ -92,6 +200,9 @@ category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" +[package.dependencies] +importlib-metadata = {version = ">=0.12", markers = "python_version < \"3.8\""} + [package.extras] dev = ["pre-commit", "tox"] @@ -103,6 +214,22 @@ category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" +[[package]] +name = "pycodestyle" +version = "2.7.0" +description = "Python style guide checker" +category = "dev" +optional = false +python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" + +[[package]] +name = "pyflakes" +version = "2.3.1" +description = "passive checker of Python programs" +category = "dev" +optional = false +python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" + [[package]] name = "pyparsing" version = "2.4.7" @@ -123,6 +250,7 @@ python-versions = ">=3.5" atomicwrites = {version = ">=1.0", markers = "sys_platform == \"win32\""} attrs = ">=17.4.0" colorama = {version = "*", markers = "sys_platform == \"win32\""} +importlib-metadata = {version = ">=0.12", markers = "python_version < \"3.8\""} more-itertools = ">=4.0.0" packaging = "*" pluggy = ">=0.12,<1.0" @@ -133,6 +261,14 @@ wcwidth = "*" checkqa-mypy = ["mypy (==v0.761)"] testing = ["argcomplete", "hypothesis (>=3.56)", "mock", "nose", "requests", "xmlschema"] +[[package]] +name = "regex" +version = "2021.7.6" +description = "Alternative regular expression module, to replace re." +category = "dev" +optional = false +python-versions = "*" + [[package]] name = "smart-open" version = "4.2.0" @@ -150,6 +286,30 @@ s3 = ["boto3"] test = ["boto3", "google-cloud-storage", "azure-storage-blob", "azure-common", "azure-core", "requests", "mock", "moto[server] (==1.3.14)", "pathlib2", "responses", "boto3", "paramiko", "parameterizedtestcase", "pytest", "pytest-rerunfailures"] webhdfs = ["requests"] +[[package]] +name = "toml" +version = "0.10.2" +description = "Python Library for Tom's Obvious, Minimal Language" +category = "dev" +optional = false +python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*" + +[[package]] +name = "tomli" +version = "1.1.0" +description = "A lil' TOML parser" +category = "dev" +optional = false +python-versions = ">=3.6" + +[[package]] +name = "typed-ast" +version = "1.4.3" +description = "a fork of Python 2 and 3 ast modules with type comment support" +category = "dev" +optional = false +python-versions = "*" + [[package]] name = "typer" version = "0.3.2" @@ -167,6 +327,22 @@ all = ["colorama (>=0.4.3,<0.5.0)", "shellingham (>=1.3.0,<2.0.0)"] dev = ["autoflake (>=1.3.1,<2.0.0)", "flake8 (>=3.8.3,<4.0.0)"] doc = ["mkdocs (>=1.1.2,<2.0.0)", "mkdocs-material (>=5.4.0,<6.0.0)", "markdown-include (>=0.5.1,<0.6.0)"] +[[package]] +name = "types-orjson" +version = "0.1.1" +description = "Typing stubs for orjson" +category = "dev" +optional = false +python-versions = "*" + +[[package]] +name = "typing-extensions" +version = "3.10.0.0" +description = "Backported and Experimental Type Hints for Python 3.5+" +category = "main" +optional = false +python-versions = "*" + [[package]] name = "wcwidth" version = "0.2.5" @@ -175,12 +351,28 @@ category = "dev" optional = false python-versions = "*" +[[package]] +name = "zipp" +version = "3.5.0" +description = "Backport of pathlib-compatible object wrapper for zip files" +category = "dev" +optional = false +python-versions = ">=3.6" + +[package.extras] +docs = ["sphinx", "jaraco.packaging (>=8.2)", "rst.linker (>=1.9)"] +testing = ["pytest (>=4.6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-cov", "pytest-enabler (>=1.0.1)", "jaraco.itertools", "func-timeout", "pytest-black (>=0.3.7)", "pytest-mypy"] + [metadata] lock-version = "1.1" -python-versions = "^3.8" -content-hash = "acb225124a6957a9e6b5e173f21fad16893af0e35fe0cb6a89c9c657269dc1fd" +python-versions = ">=3.7" +content-hash = "ea3e7463d47e0f789fb6ab9ab1b50e487b6ff4614071f57c6a53705ef459c67e" [metadata.files] +appdirs = [ + {file = "appdirs-1.4.4-py2.py3-none-any.whl", hash = "sha256:a841dacd6b99318a741b166adb07e19ee71a274450e68237b4650ca1055ab128"}, + {file = "appdirs-1.4.4.tar.gz", hash = "sha256:7d5d0167b2b1ba821647616af46a749d1c653740dd0d2415100fe26e27afdf41"}, +] asyncio = [ {file = "asyncio-3.4.3-cp33-none-win32.whl", hash = "sha256:b62c9157d36187eca799c378e572c969f0da87cd5fc42ca372d92cdb06e7e1de"}, {file = "asyncio-3.4.3-cp33-none-win_amd64.whl", hash = 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"^21.7b0" +mypy = "^0.910" +types-orjson = "^0.1.1" [tool.poetry.scripts] pypgstac = "pypgstac.pypgstac:app" diff --git a/pypgstac/requirements-dev.txt b/pypgstac/requirements-dev.txt deleted file mode 100644 index 1625db04..00000000 --- a/pypgstac/requirements-dev.txt +++ /dev/null @@ -1,3 +0,0 @@ -flake8==3.8.4 -black==20.8b1 -mypy==0.800 \ No newline at end of file diff --git a/pypgstac/setup.py b/pypgstac/setup.py deleted file mode 100644 index ff0c6e5c..00000000 --- a/pypgstac/setup.py +++ /dev/null @@ -1,40 +0,0 @@ -# -*- coding: utf-8 -*- -from setuptools import setup - -packages = \ -['pypgstac'] - -package_data = \ -{'': ['*'], - 'pypgstac': ['migrations/pgstac.0.2.5-0.2.8.sql', - 'migrations/pgstac.0.2.8.sql']} - -install_requires = \ -['asyncio>=3.4.3,<4.0.0', - 'asyncpg>=0.22.0,<0.23.0', - 'orjson>=3.5.2,<4.0.0', - 'smart-open>=4.2.0,<5.0.0', - 'typer>=0.3.2,<0.4.0'] - -entry_points = \ -{'console_scripts': ['pypgstac = pypgstac.pypgstac:app']} - -setup_kwargs = { - 'name': 'pypgstac', - 'version': '0.2.8', - 'description': '', - 'long_description': 'Python tools for working with PGStac\n', - 'author': 'David Bitner', - 'author_email': 'bitner@dbspatial.com', - 'maintainer': None, - 'maintainer_email': None, - 'url': 'https://github.com/stac-utils/pgstac', - 'packages': packages, - 'package_data': package_data, - 'install_requires': install_requires, - 'entry_points': entry_points, - 'python_requires': '>=3.8,<4.0', -} - - -setup(**setup_kwargs) diff --git a/scripts/cipublish b/scripts/cipublish index 25a0b885..cd12855d 100755 --- a/scripts/cipublish +++ b/scripts/cipublish @@ -30,6 +30,7 @@ do --test) TEST_PYPI="--repository testpypi" + poetry config repositories.testpypi https://test.pypi.org/legacy/ shift ;; @@ -50,8 +51,6 @@ fi if [ "${BASH_SOURCE[0]}" = "${0}" ]; then pushd pypgstac rm -rf dist - pip install build twine - python -m build --sdist --wheel - twine upload ${TEST_PYPI} dist/* + poetry publish --build $TEST_PYPI popd fi From d2587fc64432c2a2016858074578f1959e718ee7 Mon Sep 17 00:00:00 2001 From: David Bitner Date: Fri, 23 Jul 2021 12:59:07 -0500 Subject: [PATCH 2/3] add push to github docker registry --- .github/workflows/release.yml | 25 +++++++++++++++++++++++++ 1 file changed, 25 insertions(+) diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml index 88d57fc6..110d3b80 100644 --- a/.github/workflows/release.yml +++ b/.github/workflows/release.yml @@ -5,6 +5,10 @@ on: tags: - "*" +env: + REGISTRY: ghcr.io + IMAGE_NAME: ${{ github.repository }} + jobs: release: name: release @@ -34,3 +38,24 @@ jobs: with: repo_token: "${{ secrets.GITHUB_TOKEN }}" prerelease: false + + - name: Log in to the Container registry + uses: docker/login-action@f054a8b539a109f9f41c372932f1ae047eff08c9 + with: + registry: ${{ env.REGISTRY }} + username: ${{ github.actor }} + password: ${{ secrets.GITHUB_TOKEN }} + + - name: Extract metadata (tags, labels) for Docker + id: meta + uses: docker/metadata-action@98669ae865ea3cffbcbaa878cf57c20bbf1c6c38 + with: + images: ${{ env.REGISTRY }}/${{ env.IMAGE_NAME }} + + - name: Build and push Docker image + uses: docker/build-push-action@ad44023a93711e3deb337508980b4b5e9bcdc5dc + with: + context: . + push: true + tags: ${{ steps.meta.outputs.tags }} + labels: ${{ steps.meta.outputs.labels }} From 537685ea32edb29007a63ca860892e8ff81530dd Mon Sep 17 00:00:00 2001 From: David Bitner Date: Fri, 23 Jul 2021 13:12:23 -0500 Subject: [PATCH 3/3] fix release.yml formatting error --- .github/workflows/release.yml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml index 110d3b80..85c256bc 100644 --- a/.github/workflows/release.yml +++ b/.github/workflows/release.yml @@ -6,8 +6,8 @@ on: - "*" env: - REGISTRY: ghcr.io - IMAGE_NAME: ${{ github.repository }} + REGISTRY: ghcr.io + IMAGE_NAME: ${{ github.repository }} jobs: release: