Paolo Segre's flydra installation instructions

Instructions for installing flydra on a fresh Ubuntu 12.04 (precise pangolin) install.

Needed:

•     flydra files (downloaded from github)
  

•     adskalman files (downloaded from github)
  

•     libipp-dev.deb (obtained from Andrew)
  

•     astraw-keyring (http://debs.strawlab.org/astraw-archive-keyring.gpg)
  

1.) type:

•     sudo apt-key add astraw-archive-keyring.gpg
  

2.) add “deb http://debs.strawlab.org precise/” to /etc/apt/sources.list

3.) install the following packages:

•     python-dev
  

•     cython
  

•     python-pyrex
  

•     python-setuptools
  

•     python-motmot-fastimage-ipp
  

•     python-numpy
  

4.) install libdev.deb – you can do this from the ubuntu gui simply by double clicking

5.) install adskalman by going into the folder and typing:

•     sudo python setup.py install
  

6.) install flydra by going into the folder and typing:

•     sudo python setup.py install
  

7.) install the following packages:

• python-cgkit1
• python-tables
• python-motmot-ufmf
• python-nose
• python-motmot-realtimeimageanalysis-ipp
• python-sympy
• python-h5py
• python-cherrypy3
• python-scipy
• python-matplotlib
• graphicsmagick

These are the packages required to run many of the flydra analysis tools. Other packages are probably required to run the cameras. I will update this list as I install new packages.