DESCRIPTION

Package: Repguide
Title: Design CRISPR guide RNAs against DNA repetitive sequences
Version: 0.0.1.5
Authors@R: person("David", "Brocks", email = "davidbrocks87@gmail.com", role = c("aut", "cre"))
Description: The Repguide R package facilitates the design of guideRNAs for CRISPR/dCas9 targeting of repetitive DNA sequences, such as those derived from transposable elements..
URL: https://github.com/tanaylab/repguide/
BugReports: https://github.com/tanaylab/repguide/issues
Depends: R (>= 3.5.0)
License: GPL
Encoding: UTF-8
LazyData: true
Imports:
  ape,
  Biostrings,
  broom,
  BSgenome,
  cowplot,
  DECIPHER,
  data.table,
  dplyr,
  forcats,
  foreach,
  fs,
  gridExtra,
  GenomicRanges,
  ggplot2,
  glue,
  kmer,
  magrittr,
  Matrix,
  matrixStats,
  plyr,
  purrr,
  qlcMatrix,
  Rbowtie,
  rtracklayer,
  R.utils,
  scales,
  skmeans,
  stringr,
  stringdist,
  tibble,
  tidyr
RoxygenNote: 7.1.0
Roxygen: list(markdown = TRUE)
Suggests: 
    doMC,
    knitr,
    rmarkdown,
    testthat
VignetteBuilder: knitr
Collate: 
    'guideSet.R'
    'accessors.R'
    'add.R'
    'annotate.R'
    'compute.R'
    'export.R'
    'extdata.R'
    'import.R'
    'package-Repguide.R'
    'plot.R'
    'select.R'
    'utilities.R'
    'zzz.R'