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pom.xml
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pom.xml
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<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>de.mybehr.projects</groupId>
<artifactId>orphaned-peptide-finder</artifactId>
<version>1.1.0-SNAPSHOT</version>
<packaging>jar</packaging>
<name>orphan-peptide-finder</name>
<properties>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
<kotlin.version>1.0.6</kotlin.version>
<tornadofx.version>1.5.9</tornadofx.version>
<opencsv.version>2.3</opencsv.version>
<guice.version>4.1.0</guice.version>
<biojava.version>4.1.0</biojava.version>
<junit.version>4.12</junit.version>
<mockito.version>1.10.19</mockito.version>
<assertj.version>1.7.1</assertj.version>
</properties>
<dependencies>
<dependency>
<groupId>org.biojava</groupId>
<artifactId>biojava-core</artifactId>
<version>${biojava.version}</version>
</dependency>
<dependency>
<groupId>net.sf.opencsv</groupId>
<artifactId>opencsv</artifactId>
<version>${opencsv.version}</version>
</dependency>
<dependency>
<groupId>com.google.inject</groupId>
<artifactId>guice</artifactId>
<version>${guice.version}</version>
</dependency>
<dependency>
<groupId>no.tornado</groupId>
<artifactId>tornadofx</artifactId>
<version>${tornadofx.version}</version>
</dependency>
<dependency>
<groupId>org.jetbrains.kotlin</groupId>
<artifactId>kotlin-stdlib</artifactId>
<version>${kotlin.version}</version>
</dependency>
<dependency>
<groupId>org.jetbrains.kotlin</groupId>
<artifactId>kotlin-test-junit</artifactId>
<version>${kotlin.version}</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
<version>${junit.version}</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.mockito</groupId>
<artifactId>mockito-all</artifactId>
<version>${mockito.version}</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.assertj</groupId>
<artifactId>assertj-core</artifactId>
<version>${assertj.version}</version>
<scope>test</scope>
</dependency>
</dependencies>
<build>
<sourceDirectory>src/main/kotlin</sourceDirectory>
<testSourceDirectory>src/test/kotlin</testSourceDirectory>
<plugins>
<plugin>
<groupId>org.jetbrains.kotlin</groupId>
<artifactId>kotlin-maven-plugin</artifactId>
<version>${kotlin.version}</version>
<executions>
<execution>
<id>compile</id>
<phase>compile</phase>
<goals>
<goal>compile</goal>
</goals>
</execution>
<execution>
<id>test-compile</id>
<phase>test-compile</phase>
<goals>
<goal>test-compile</goal>
</goals>
</execution>
</executions>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-assembly-plugin</artifactId>
<version>2.6</version>
<executions>
<execution>
<id>make-assembly</id>
<phase>package</phase>
<goals> <goal>single</goal> </goals>
<configuration>
<archive>
<manifest>
<mainClass>dk.aau.bio.opf.OrphanPeptideFinderApp</mainClass>
</manifest>
</archive>
<descriptorRefs>
<descriptorRef>jar-with-dependencies</descriptorRef>
</descriptorRefs>
</configuration>
</execution>
</executions>
</plugin>
</plugins>
</build>
</project>