MOLGENIS - for scientific data: management, exploration, integration and analysis.
-
Updated
Dec 22, 2023 - Java
MOLGENIS - for scientific data: management, exploration, integration and analysis.
An R package to manipulate and explore UK Biobank data
ukbREST: efficient and streamlined data access for reproducible research of large biobanks
Biorepository application for tracking biospecimens.
Inofficial R client for the DSMZ's Bacterial Diversity Metadatabase (former contact: @katrinleinweber). https://api.bacdive.dsmz.de/client_examples seems to be the official alternatives.
The Minimum Information About BIobank data Sharing (MIABIS) is a biobank-specific terminology enabling the sharing of minimal biobank-related data for different purposes across a wide range of database implementations.
An Open-source access negotation system for Research Infrastructures
The BBMRI-ERIC Negotiator service for structured negotiation with biological resources dealing with human data and/or biological samples.
Command line tool written in c++ for easily extracting light and temperature data from Axivity AX3 accelerometers used in the UKBiobank
LImBuS is an open source, standards compliant Biobank Information Management System developed by researchers from Aberystwyth University.
snpnet - Efficient Lasso Solver for Large-scale genetic variant data
The BBMRI-ERIC Negotiator is a service for structured negotiation with biological resources dealing with human data and/or biological samples. The reference implementation for the frontend is available in this repository.
A data integration tool for BBMRI-ERIC biobanks.
Development medical module software for biobank.
Multiresponse time-to-event Cox proportional hazards model - GPU
Multiresponse time-to-event Cox proportional hazards model - CPU
exploration of TreeWas/TreeWas2 code for the Zaitlen lab. Based on TreeWas developed by McVean Lab @ Oxford.
Add a description, image, and links to the biobank topic page so that developers can more easily learn about it.
To associate your repository with the biobank topic, visit your repo's landing page and select "manage topics."