A single-cell RNAseq pipeline for 10X genomics data
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Updated
Aug 8, 2024 - Nextflow
A single-cell RNAseq pipeline for 10X genomics data
scRNA-seq analysis 2022 workshop hosted by UMICH's CDS-SR
simplified cellranger for long-read data
WDLized Cell Ranger GEX
Nextflow pipeline wrapper for executing Cell Ranger
WDLized Cell Ranger Cell Plex
10x Cell Ranger Docker Image
A Haskell script that takes in a configuration YAML to create and launch Cell Ranger count and/or vdj runs via LSF bsub commands accordingly.
Repository of the master project in Bioinformatics at Lund University
Basic scRNA-seq analysis in Seurat using GBM data
V(D)J T Cell and B Cell Analysis with cellranger vdj
A Snakemake Workflow for using PolyA_DB and UCSC LiftOver with CellRanger
WDL workflow language program, developed for singlecell rna sequencing data analysis, maintained by @sunhao(OOAAHH)
A Snakemake workflow for analysing single cell data obtained from Cell ranger platform using Seurat package
用于bioos的大规模数据分析
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