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The repository contains the source code and the report for the COPD lung CT registration challenge that was held as a final project of the course of Medical image registration (MIRA) in University of Girona.
High-dimensional image registration workflow as part of the MIAAIM framework. Hdi-reg is written in Python, and utilizes the Elastix library for computations.
Lung Registration Project: A comprehensive toolkit for lung image registration and analysis. Utilizing advanced algorithms in Python and Jupyter Notebook, this project aims to facilitate accurate and efficient alignment of lung images for medical imaging studies
This repository contrains source code and the report for the COPD lung CT registration challenge. It was the final assignment for the Medical Image Registration and Analysis course at the University of Girona for the MAIA programme.
This repository contains the code for registration of Chest CT done with inspiratory and expiratory breath-hold CT image pairs. The dataset used is COPDGene dataset. The dataset has landmarks for all the inhale-exhale image pairs which are used to calculate the registration error.
Registration of animal MR brain data to a standard (published) atlas. The pipeline works with invivo or exvivo (skull-stripped) MR-data for the following species: mouse, rat, Etruscan shrew and cat. *OS: Windows, MAC, Linux. *Matlab: R2016a or later.