Script developed to transform the amino acid smiles to one letter code for later analysis
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Updated
Feb 25, 2022 - Python
Script developed to transform the amino acid smiles to one letter code for later analysis
Binary string classification of SMILES with an LSTM
This Streamlit app allows you to search for the most "druglike" molecules basing on the "Rule of five"
Taffi component increment theory used to predict enthalpy of formation, standard entropy and heat capacity.
SMILES, SELFIES and Reaction SMILES augmentation using RDKit
SMILES converted into Graphs that contains atomic information, bonding informatics. Graphs considered as input for the NN to Predict Melting Pont of Liquid Crystals (LCs)
Training pre-trained BERT language model on molecular SMILES from the Molecule Net benchmark by leveraging mixup and enumeration augmentations.
All the codes used by team "SlytherinSeers" are available here.
A tensorflow.keras generative neural network for de novo drug design, first-authored in Nature Machine Intelligence while working at AstraZeneca.
Code to retrieve drugs against a desired target using the ChEMBL database API
One-hot encoding for simple molecular-input line-entry system (SMILES) strings
A PyTorch and TorchDrug based deep learning library for drug pair scoring. (KDD 2022)
Encoder-decoders for translating different chemical formats.
Variational Autoencoder (VAE)-based molecular SMILES string generator
Python codes of ASCII Text Based Chemical Structure Tuner (ACST): String Reversal Mechanism for SMILES Notation.
Bio-cheminformatics project in progress to predict small molecule inhibitory potential (IC50) against 11β-HSD1
⬢⬢⬢ Organizing and processing tables of chemical structures.
A lightweight python-only library for reading and writing SMILES strings
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