toxpiR R package for the Toxicological Priority Index (ToxPi) algorithm.
-
Updated
Aug 7, 2024 - R
toxpiR R package for the Toxicological Priority Index (ToxPi) algorithm.
The eNanoMapper ontology
links related to SEND/Nonclinical toxicology
An adverse drug reaction (ADR) is described by the World Health Organization (WHO) as a 'response to a medicine which is noxious and unintended, and which occurs at doses normally used in man
The rebirth of IMPACT World+ in a fully automated and transparent fashion.
Health Assessment Workspace Collaborative, a content management system for systematic reviews
My personal website, served at https://cthoyt.com
A Python module for analysis and visualization of dose-response data
Bayesian No-Effect-Concentration estimation in R
A query engine to retrive information from AOP wiki graph database.
Improve molecular networking usage in toxicology.
A collection of R scripts to analyze toxicologic path data
A collection of projects from my experience as a Biostatistics/Bioinformatics fellow at NIOSH in Cincinnati, Ohio.
Endocrine Disruption Explainer is a code to generate structural alerts of endocrine disruption of chemcial compounds using Local Interpretable Model-Agnostic Explanations (LIME) of machine learning models from TOX-21, EDC, and EDKB-FDA datasets.
BBBP Explainer is a code to generate structural alerts of blood-brain barrier penetrating and non-penetrating drugs using Local Interpretable Model-Agnostic Explanations (LIME) of machine learning models from BBBP dataset.
[Frontend] A knowledge graph system with graph neural network for drug discovery, disease mechanism and biomarker screening.
The public version of the 'XploreAOP' Shiny application to interactively visualize AOP Networks
R Shiny App to Visualize and Summarize Repeat-Dose Toxicology Study Results
Analysis of Ecotoxicology
Write reproducible code for getting and processing ChEMBL
Add a description, image, and links to the toxicology topic page so that developers can more easily learn about it.
To associate your repository with the toxicology topic, visit your repo's landing page and select "manage topics."