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when I ran the painting.py I came across such a bug: File "........./scenarios/inferringAncestorGenomeStructure/BlockMatchingOptimization.py", line 66, in <genexpr> (i[0][3] * match_matrix[int(i[0][1] / (self.__matching_dim1*2)), KeyError: (87, 1, 0)
It only appear when I draw the chromosome rearrangement plot for M.domestica (apple), it has undergone one WGD event. but for other species without WGD there is no problem. so it seems like the bug is related to WGD ?
How can I fix it. thank you !
The text was updated successfully, but these errors were encountered:
Sorry for the late reply, have you solved the problem?
I cannot determine where the problem is only based on this log.
It may be due to the input format. Can you send us your input data by e-mail? gaoxian15002970749@163.com
when I ran the painting.py I came across such a bug:
File "........./scenarios/inferringAncestorGenomeStructure/BlockMatchingOptimization.py", line 66, in <genexpr> (i[0][3] * match_matrix[int(i[0][1] / (self.__matching_dim1*2)), KeyError: (87, 1, 0)
It only appear when I draw the chromosome rearrangement plot for M.domestica (apple), it has undergone one WGD event. but for other species without WGD there is no problem. so it seems like the bug is related to WGD ?
How can I fix it. thank you !
The text was updated successfully, but these errors were encountered: