feat: Add function to load components from Mask Segmentaion with background in ROI Analysis

[Czaki]

No description provided.

[sourcery-ai]

Sourcery Code Quality Report

✅  Merging this PR will increase code quality in the affected files by 1.71%.

Quality metrics	Before	After	Change
Complexity	5.89 ⭐	5.24 ⭐	-0.65 👍
Method Length	58.33 ⭐	57.48 ⭐	-0.85 👍
Working memory	7.44 🙂	7.22 🙂	-0.22 👍
Quality	68.78% 🙂	70.49% 🙂	1.71% 👍

Other metrics	Before	After	Change
Lines	2792	2844	52

Changed files	Quality Before	Quality After	Quality Change
package/PartSeg/_roi_mask/batch_proceed.py	48.44% 😞	47.75% 😞	-0.69% 👎
package/PartSeg/common_gui/algorithms_description.py	75.75% ⭐	75.88% ⭐	0.13% 👍
package/PartSeg/common_gui/custom_save_dialog.py	67.52% 🙂	67.41% 🙂	-0.11% 👎
package/PartSeg/plugins/napari_widgets/utils.py	83.60% ⭐	83.61% ⭐	0.01% 👍
package/PartSegCore/algorithm_describe_base.py	66.77% 🙂	66.63% 🙂	-0.14% 👎
package/PartSegCore/analysis/load_functions.py	61.48% 🙂	62.18% 🙂	0.70% 👍
package/PartSegCore/mask/io_functions.py	54.21% 🙂	64.20% 🙂	9.99% 👍
package/tests/conftest.py	81.47% ⭐	82.72% ⭐	1.25% 👍
package/tests/test_PartSeg/conftest.py	86.56% ⭐	86.16% ⭐	-0.40% 👎

Here are some functions in these files that still need a tune-up:

File	Function	Complexity	Length	Working Memory	Quality	Recommendation
package/PartSeg/_roi_mask/batch_proceed.py	BatchProceed.run_calculation	25 😞	402 ⛔	13 😞	24.66% ⛔	Refactor to reduce nesting. Try splitting into smaller methods. Extract out complex expressions
package/PartSegCore/analysis/load_functions.py	load_project	17 🙂	424 ⛔	17 ⛔	25.13% 😞	Try splitting into smaller methods. Extract out complex expressions
package/PartSegCore/mask/io_functions.py	load_stack_segmentation	19 😞	405 ⛔	14 😞	27.20% 😞	Refactor to reduce nesting. Try splitting into smaller methods. Extract out complex expressions
package/PartSegCore/mask/io_functions.py	save_components	13 🙂	309 ⛔	15 😞	32.67% 😞	Try splitting into smaller methods. Extract out complex expressions
package/PartSegCore/algorithm_describe_base.py	ROIExtractionProfile._pretty_print	21 😞	224 ⛔	12 😞	34.52% 😞	Refactor to reduce nesting. Try splitting into smaller methods. Extract out complex expressions

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• ⛔ very poor

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[deprecated-napari-hub-preview-bot]

Preview page for your plugin is ready here:
https://preview.napari-hub.org/4DNucleome/PartSeg/768
Updated: 2022-10-23T19:51:13.490417

[codecov]

Codecov Report

Base: 89.29% // Head: 89.46% // Increases project coverage by +0.16% 🎉

Coverage data is based on head (81a9767) compared to base (9986dc4).
Patch coverage: 94.23% of modified lines in pull request are covered.

Additional details and impacted files

@@             Coverage Diff             @@
##           develop     #768      +/-   ##
===========================================
+ Coverage    89.29%   89.46%   +0.16%     
===========================================
  Files          191      192       +1     
  Lines        29615    29678      +63     
===========================================
+ Hits         26446    26552     +106     
+ Misses        3169     3126      -43     

Impacted Files	Coverage Δ
package/tests/test_PartSeg/conftest.py	89.25% <ø> (-1.84%)	⬇️
package/PartSeg/common_gui/custom_save_dialog.py	84.12% <75.00%> (ø)
package/PartSegCore/analysis/load_functions.py	81.81% <88.88%> (ø)
package/PartSegCore/mask/io_functions.py	88.34% <92.40%> (+1.21%)	⬆️
package/PartSeg/_roi_mask/batch_proceed.py	89.65% <92.85%> (+45.60%)	⬆️
...ckage/PartSeg/common_gui/algorithms_description.py	94.88% <94.44%> (-0.10%)	⬇️
package/PartSeg/plugins/napari_widgets/utils.py	92.72% <100.00%> (+1.65%)	⬆️
package/PartSegCore/algorithm_describe_base.py	86.21% <100.00%> (-0.05%)	⬇️
package/tests/conftest.py	92.25% <100.00%> (+1.34%)	⬆️
package/tests/test_PartSeg/roi_mask/test_batch.py	100.00% <100.00%> (ø)
... and 3 more

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[lgtm-com]

This pull request introduces 1 alert when merging ac395dc into 9986dc4 - view on LGTM.com

new alerts:

• 1 for Module is imported with 'import' and 'import from'