ci: [pre-commit.ci] pre-commit autoupdate

.pre-commit-config.yaml

@@ -25,7 +25,7 @@ repos:
     - id: setup-cfg-fmt
       args: ["--include-version-classifiers", "--max-py-version", "3.11"]
 -   repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.0.277
+    rev: v0.0.280
     hooks:
       - id: ruff
 -   repo: https://github.com/asottile/pyupgrade

package/PartSeg/common_backend/base_settings.py

@@ -456,7 +456,7 @@ def __init__(self, json_path: Union[Path, str], profile_name: str = "default"):
         """
         super().__init__()
         napari_path = os.path.dirname(json_path) if os.path.basename(json_path) in ["analysis", "mask"] else json_path
-        self.napari_settings: "NapariSettings" = napari_get_settings(napari_path)
+        self.napari_settings: NapariSettings = napari_get_settings(napari_path)
         self._current_roi_dict = profile_name
         self._roi_dict = ProfileDict()
         self._last_algorithm_dict = ProfileDict()

package/PartSeg/plugins/napari_widgets/colormap_control.py

@@ -26,15 +26,17 @@ def __init__(
         self.update_preview()
 
     def update_preview(self, _event=None):
-        if len(self.viewer.layers.selection) == 1 and isinstance(list(self.viewer.layers.selection)[0], Image):
+        if len(self.viewer.layers.selection) == 1 and isinstance(next(iter(self.viewer.layers.selection)), Image):
             self.apply_colormap_btn.setEnabled(True)
             self.apply_colormap_btn.setToolTip("Apply colormap to selected layer")
         else:
             self.apply_colormap_btn.setEnabled(False)
             self.apply_colormap_btn.setToolTip("Select one image layer to apply colormap")
 
     def apply_colormap(self):
-        if len(self.viewer.layers.selection) == 1 and isinstance(layer := list(self.viewer.layers.selection)[0], Image):
+        if len(self.viewer.layers.selection) == 1 and isinstance(
+            layer := next(iter(self.viewer.layers.selection)), Image
+        ):
             layer.colormap = self.colormap
 
 

package/PartSeg/plugins/napari_widgets/lables_control.py

@@ -23,7 +23,7 @@ def __init__(self, viewer: Viewer, name: str, label: List[Sequence[float]], remo
         self.apply_label_btn.clicked.connect(self.apply_label)
 
     def update_preview(self, _event=None):
-        if len(self.viewer.layers.selection) == 1 and isinstance(list(self.viewer.layers.selection)[0], Labels):
+        if len(self.viewer.layers.selection) == 1 and isinstance(next(iter(self.viewer.layers.selection)), Labels):
             self.apply_label_btn.setEnabled(True)
             self.apply_label_btn.setToolTip("Apply labels to selected layer")
         else:
@@ -32,7 +32,7 @@ def update_preview(self, _event=None):
 
     def apply_label(self):
         if len(self.viewer.layers.selection) == 1 and isinstance(
-            layer := list(self.viewer.layers.selection)[0], Labels
+            layer := next(iter(self.viewer.layers.selection)), Labels
         ):
             max_val = layer.data.max()
             labels = {i + 1: [x / 255 for x in self.label[i % len(self.label)]] for i in range(max_val + 5)}

package/PartSegCore/algorithm_describe_base.py

@@ -598,7 +598,7 @@ def base_model_to_algorithm_property(obj: typing.Type[BaseModel]) -> typing.List
     :return:
     """
     res = []
-    value: "ModelField"
+    value: ModelField
     if hasattr(obj, "header") and obj.header():
         res.append(obj.header())
     for name, value in obj.__fields__.items():

package/PartSegCore/io_utils.py

@@ -204,8 +204,8 @@ def load_metadata_base(data: typing.Union[str, Path]):
     except ValueError as e:
         try:
             decoded_data = json.loads(str(data), object_hook=partseg_object_hook)
-        except Exception:
-            raise e
+        except Exception:  # pragma: no cover
+            raise e  # noqa: B904
 
     return decoded_data
 

package/tests/test_PartSeg/test_colormap_create.py

@@ -235,7 +235,7 @@ def check_res(colormap):
 
         cmap_dict = base_settings.get_from_profile("custom_colormap")
         assert len(cmap_dict) == 1
-        assert check_res(list(cmap_dict.values())[0])
+        assert check_res(next(iter(cmap_dict.values())))
 
     def test_custom_colors_save(self, qtbot, base_settings):
         widget = PColormapCreator(base_settings)

package/tests/test_PartSegCore/test_analysis_batch.py

@@ -759,7 +759,7 @@ def test_fail_single_mask_project(self, tmp_path, calculation_plan_dummy):
         res = calc_process.do_calculation(FileCalculation(file_path, calc))
         assert len(res) == 4
         assert sum(isinstance(x, ResponseData) for x in res) == 3
-        assert isinstance(list(dropwhile(lambda x: isinstance(x, ResponseData), res))[0][0], ValueError)
+        assert isinstance(next(iter(dropwhile(lambda x: isinstance(x, ResponseData), res)))[0], ValueError)
 
     @pytest.mark.usefixtures("_prepare_spacing_data")
     @pytest.mark.usefixtures("_register_dummy_spacing")