rename WOMBAT to WOMBATlite

Update to spack dev exe

config.yaml

@@ -14,11 +14,11 @@ jobfs: 10GB
 mem: 192GB
 
 walltime: 01:00:00
-jobname: 1deg_jra55do_ryf_wombat
+jobname: 1deg_jra55do_ryf_wombatlite
 
 model: access-om3
 
-exe: /g/data/tm70/ds0092/model/access-om3/Release/bin/access-om3-MOM6-CICE6
+exe: /g/data/tm70/ds0092/model/dev/access-om3-gtracer/.spack-env/view/bin/access-om3-MOM6-CICE6
 input:
     - /g/data/vk83/experiments/inputs/access-om3/share/meshes/global.1deg/2024.01.25/access-om2-1deg-ESMFmesh.nc
     - /g/data/vk83/experiments/inputs/access-om3/share/meshes/global.1deg/2024.01.25/access-om2-1deg-nomask-ESMFmesh.nc

field_table

@@ -1,8 +1,8 @@
-# WOMBAT field table
+# WOMBATlite field table
 # ===============================================
-"namelists","ocean_mod","generic_wombat/*global*"
+"namelists","ocean_mod","generic_wombatlite/*global*"
 /
-"namelists","ocean_mod","generic_wombat"
+"namelists","ocean_mod","generic_wombatlite"
 init = f
 #
 no3_src_file = INPUT/GLODAPv2.2016b.NO3_fillmiss.nc

generate_wombat_ic.py → generate_wombatlite_ic.py

@@ -2,13 +2,13 @@
 # SPDX-License-Identifier: Apache-2.0
 
 # =========================================================================================
-# Generate constant initial conditions for WOMBAT using grid from a provided file
+# Generate constant initial conditions for WOMBATlite using grid from a provided file
 #
 # To run:
-#   python generate_wombat_ic.py --grid-filename=<path-to-grid-file> --variable-name=<variable-name>
-#       --ic-filename=<path-to-output-file>
+#   python generate_wombatlite_ic.py --grid-filename=<path-to-grid-file>
+#       --variable-name=<variable-name> --ic-filename=<path-to-output-file>
 #
-# For more information, run `python generate_wombat_ic.py -h`
+# For more information, run `python generate_wombatlite_ic.py -h`
 #
 # Contact:
 #   Dougie Squire <dougal.squire@anu.edu.au>
@@ -53,7 +53,7 @@ def git_info():
 
 def main():
     parser = argparse.ArgumentParser(
-        description="Generate constant initial conditions for WOMBAT using grid from provided file."
+        description="Generate constant initial conditions for WOMBATlite using grid from provided file."
     )
 
     parser.add_argument(

input.nml

@@ -7,11 +7,11 @@
 
 &generic_tracer_nml
     do_generic_tracer=.true.
-    do_generic_WOMBAT=.true.
+    do_generic_WOMBATlite=.true.
     force_update_fluxes=.false. !This has to be set for THERMO_SPANS_COUPLING to work
 /
 
-&generic_wombat_nml
+&generic_wombatlite_nml
     co2_calc='ocmip2'
 /
 

manifests/exe.yaml

@@ -2,7 +2,7 @@ format: yamanifest
 version: 1.0
 ---
 work/access-om3-MOM6-CICE6:
-  fullpath: /g/data/tm70/ds0092/model/access-om3/Release/bin/access-om3-MOM6-CICE6
+  fullpath: /g/data/tm70/ds0092/model/dev/access-om3-gtracer/.spack-env/view/bin/access-om3-MOM6-CICE6
   hashes:
-    binhash: 4d5adf5212f4a86e4cccd088fc256130
-    md5: 7e8f09ea185c37e0f63b2aed1c8b3bd6
+    binhash: a552bb930c86df92cf883e3aaf8129bf
+    md5: 1b1e5d28a25aeee06ebcfcda2dde2f94

nuopc.runconfig

@@ -138,7 +138,7 @@ ALLCOMP_attributes::
      tfreeze_option = linear_salt
      wav_coupling_to_cice = .false.
      write_restart_at_endofrun = .false.
-     additional_restart_dir = RESTART/
+     additional_restart_dir = RESTART
 ::
 
 MED_attributes::