Merge pull request #98 from AICAN-Research/citation-fix #266
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| name: Build Ubuntu | |
| on: | |
| push: | |
| branches: | |
| - "*" | |
| pull_request: | |
| branches: [ master ] | |
| release: | |
| types: [ published ] | |
| workflow_dispatch: | |
| jobs: | |
| build: | |
| runs-on: ubuntu-20.04 | |
| container: | |
| image: ubuntu:18.04 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3.3.0 | |
| - name: Create path | |
| run: | | |
| mkdir -p ./downloads/ | |
| - name: Download FAST | |
| uses: robinraju/release-downloader@v1.8 | |
| with: | |
| repository: "AICAN-Research/FAST-Pathology-dependencies" | |
| latest: true | |
| fileName: "fast_ubuntu18.04.tar.xz" | |
| out-file-path: "./downloads/" | |
| - name: Setup apt and deps | |
| run: | | |
| apt update && apt install -y sudo | |
| sudo apt-get install xz-utils | |
| - name: Extract FAST | |
| run: | | |
| tar -xf ./downloads/fast_*.tar.xz -C ./downloads/ | |
| mv ./downloads/fast_*/fast ./ | |
| - name: Install dependencies | |
| run: | | |
| # Get a newer version of cmake | |
| sudo apt install -y gpg wget software-properties-common lsb-release | |
| wget -O - https://apt.kitware.com/keys/kitware-archive-latest.asc 2>/dev/null | gpg --dearmor - | sudo tee /usr/share/keyrings/kitware-archive-keyring.gpg >/dev/null | |
| echo 'deb [signed-by=/usr/share/keyrings/kitware-archive-keyring.gpg] https://apt.kitware.com/ubuntu/ bionic main' | sudo tee /etc/apt/sources.list.d/kitware.list >/dev/null | |
| sudo apt-get update | |
| sudo rm /usr/share/keyrings/kitware-archive-keyring.gpg | |
| sudo apt-get install kitware-archive-keyring | |
| sudo apt install -y cmake | |
| sudo apt install -y g++ patchelf | |
| sudo apt install -y '^libxcb.*-dev' libx11-xcb-dev libglu1-mesa-dev libxrender-dev libxi-dev libxkbcommon-dev libxkbcommon-x11-dev | |
| sudo apt install -y libopenslide-dev libjpeg-turbo8-dev # Needed for WSI module | |
| - name: Configure CMake | |
| run: cmake -B build -DFAST_DIR=./fast/cmake/ | |
| - name: Build FastPathology | |
| run: cmake --build build --config Release -j 4 | |
| - name: Build Package | |
| run: cmake --build build --config Release --target package -j 4 | |
| - name: Upload Debian package | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: Debian package | |
| path: ./build/fastpathology_*.deb | |
| if-no-files-found: error | |
| - name: Upload Debian package to release | |
| if: ${{ github.event_name == 'release' }} | |
| uses: svenstaro/upload-release-action@2.7.0 | |
| with: | |
| repo_token: ${{ secrets.GITHUB_TOKEN }} | |
| file: ./build/fastpathology_*.deb | |
| file_glob: true | |
| tag: ${{ github.ref }} | |
| overwrite: true |