v0.6.5

NEW FEATURES

• Add 'check_gcae_experiment_params_filename'
• Add 'create_plots_from_gcae_experiment_results'
• Add 'create_test_gcae_experiment_params'
• Add 'read_gcae_experiment_params_file'
• Add 'save_gcae_experiment_params'
• Add 'save_gcae_experiment_results'

MINOR IMPROVEMENTS

• 'check_superpops' also checks for spaces in the filename

BUG FIXES

• None

v0.6.4

NEW FEATURES

• Add 'analyse_qt_prediction'
• Add 'analyse_qt_prediction_depersonalized'
• Add 'check_epoch'
• Add 'check_metric'
• Add 'check_metrics'
• Add 'create_gcae_evaluate_args'
• Add 'do_gcae_experiment'
• Add 'gcae_evaluate'
• Add 'gcae_train_more'
• Add 'read_gcae_options_file'
• Add 'read_gcae_setup_file'
• Add 'rename_files'
• Add 'save_gcae_options'
• Add 'save_gcae_setup'

MINOR IMPROVEMENTS

• None

BUG FIXES

• None

v0.6.3

NEW FEATURES

• Add 'check_gcae_input_files'
• Add 'create_gcae_input_data'
• Add 'create_test_gcae_input_data'
• Add 'create_test_gcae_input_filenames'
• Add 'get_test_labels_table'
• Add 'resize_to_shared_individuals_from_data'
• Add 'resize_to_shared_individuals_from_files'
• Add 'save_gcae_input_data'
• Add 'summarise_gcae_input_data'
• Add 'summarise_gcae_input_files'

MINOR IMPROVEMENTS

• None

BUG FIXES

• None

DEPRECATED AND DEFUNCT

• Use 'save_labels_table' instead of 'save_labels_file', as the function
  saves a 'label_table'

v0.6.1

New versions of plinkr and ormr

v0.6

• ormr and GenoCAE folder are separated

v0.5.1

• Can specify a separate GCAE and ormr folder

v0.5

Can run GenoCAE from R and do the core of the workflow

v0.4

NEW FEATURES

• Singularity container is based on the ormr Singularity container
  (which is subsequently based upon the plinkr Singularity container)
• Fixes bug in GenoCAE,
  use the richelbilderbeek Fork of GCAE
  as the main repo
• Can run gcae_train on a phenotype

MINOR IMPROVEMENTS

• None

BUG FIXES

• None

DEPRECATED AND DEFUNCT

• None

v0.3

NEW FEATURES

• Added Singularity container

MINOR IMPROVEMENTS

• None

BUG FIXES

• None

DEPRECATED AND DEFUNCT

• None

v0.2

NEW FEATURES

• Can project GCAE using gcae_project
• Can plot the results of the GCAE using gcae_plot

MINOR IMPROVEMENTS

• None

BUG FIXES

• None

DEPRECATED AND DEFUNCT

• None