Sarah

[camcamacam]

Hello everyone! Please use this checklist over the next few weeks as you go through your health data science journey 🎉. Tick each item as your complete it!

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Week 2: Your first repository

• 1. Install GitHub desktop and connect it to your GitHub account
• 2. Create a public repository and add a readme file
• 3. Publish the repository to GitHub
• 4. Add a new file in your local repository, commit the file addition, and push it to the remote repository on GitHub
• 5. Modify the new file (or the Readme file), commit the change, and push it to the remote repository on GitHub
• 6. Comment on this issue with a link to your repository

Week 4: Rmarkdown

• 1. Create a new public repository on GitHub Desktop and add a readme file.
• 2. Publish the repository to GitHub
• 3. Open RStudio and create a new project in an existing directory (the directory of your repository)
• 4. Download the file "R_Rstudio_Rmarkdown.Rmd" from the week 4 "Practical: R markdown" section on MyAberdeen and save it in your project
• 5. Work through the Rmarkdown file, remembering to commit and push your changes to the remote repository on GitHub
• 6. Optional: if you have questions you'd like to discuss with your group members, create issues on GitHub and let them know
• 7. Comment on this issue with a link to your new repository

Week 5: Practical: reading data in R

• 1. Create a new public repository on GitHub Desktop and add a readme file. This will be the main repository for the R material from this course, so give it a good name 😃
• 2. Publish the repository to GitHub
• 3. Open RStudio and create a new project in an existing directory (the directory of your repository)
• 4. Create an appropriate folder structure according to the good coding practices discussed in week 5
• 5. Download the data files and Rmarkdown file from the week 5 "Practical: reading data in R" section on MyAberdeen and save them in the appropriate folders in your project
• 6. Work through the Rmarkdown file, remembering to commit and push your changes to the remote repository on GitHub
• 7. Optional: if you have questions you'd like to discuss with your collaborators, create issues on GitHub and let them know
• 8. Comment on this issue with a link to your new repository

Week 6-10: Your project
Now that you have become familiar with GitHub, you can start using it to prepare your report, and get help and feedback from your group members.

• Comment on this issue with a link to your report repository

[camcamacam]

Here is a link to my repository:

https://github.com/camcamacam/testrepo/blob/main/.gitattributes

[dblana]

Hi Sarah 😃 , could you please make sure your repository is public?

[camcamacam]

Hi I've updated it now so hopefully should be public. Thanks, Sarah

…

________________________________ From: Dimitra Blana ***@***.***> Sent: 07 October 2024 08:16 To: AbdnCHDS/Intro2HDS_2024 ***@***.***> Cc: CAM, SARAH (PGT) ***@***.***>; Author ***@***.***> Subject: CHECK MESSAGE SENDER:Re: [AbdnCHDS/Intro2HDS_2024] Sarah (Issue #26) You don't often get email from ***@***.*** Learn why this is important<https://aka.ms/LearnAboutSenderIdentification> WARNING: This email uses the name of a University staff member, but is not from a University email account. Be sure you know who this is before replying. CAUTION: External email. Ensure this message is from a trusted source and exercise caution before clicking links/opening attachments. Hi Sarah 😃 , could you please make sure your repository is public? — Reply to this email directly, view it on GitHub<#26 (comment)>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/BL3QQAX7MDNR7RMMCAXC3NLZ2IYNPAVCNFSM6AAAAABPN4UL22VHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDGOJWGEYDINBQHE>. You are receiving this because you authored the thread.Message ID: ***@***.***> The University of Aberdeen is a charity registered in Scotland, No SC013683. Tha Oilthigh Obar Dheathain na charthannas clàraichte ann an Alba, Àir. SC013683.

[dblana]

Yes, it's public now! Well done - just make sure you add a Readme file.

[camcamacam]

Here is a belated link to my repository:

https://github.com/camcamacam/Rmarkdown