Merge pull request #122 from AllenCellModeling/fix/publish-pypi #119
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| on: | |
| push: | |
| branches: | |
| - main | |
| schedule: | |
| - cron: 0 18 * * 1 | |
| workflow_dispatch: | |
| env: | |
| CIBW_TEST_COMMAND: pytest {project}/aicspylibczi/tests | |
| CIBW_TEST_EXTRAS: test | |
| # skip python 3.6, 32-bit builds, and PyPy | |
| CIBW_SKIP: cp36-* cp37-* *-win32 *-manylinux_i686 pp* | |
| name: Python Build Main | |
| jobs: | |
| python-test: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| python-version: [3.8, 3.9, "3.10", 3.11, 3.12] | |
| os: [ubuntu-latest, windows-latest, macos-latest] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| submodules: true | |
| - name: setup python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip setuptools | |
| pip install .[test] | |
| - name: Test with pytest | |
| run: | | |
| pytest --cov-report xml --cov=aicspylibczi aicspylibczi/tests | |
| lint: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| submodules: true | |
| - name: Set up Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.10" | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip setuptools | |
| pip install .[test] | |
| - name: Lint with flake8 | |
| run: | | |
| flake8 aicspylibczi --count --verbose --max-line-length=127 --show-source --statistics | |
| build_sdist: | |
| name: Build SDist | |
| needs: [python-test, lint] | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| submodules: true | |
| - name: Build SDist | |
| run: pipx run build --sdist | |
| - name: Check metadata | |
| run: pipx run twine check dist/* | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| name: build-sdist | |
| path: dist/*.tar.gz | |
| build_wheels: | |
| name: Wheels on ${{ matrix.cibw-arch }} | |
| needs: [python-test, lint] | |
| runs-on: ${{ matrix.runs-on }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| include: | |
| - runs-on: ubuntu-latest | |
| cibw-arch: manylinux_x86_64 | |
| - runs-on: macos-latest | |
| cibw-arch: macosx_x86_64 | |
| - runs-on: macos-latest | |
| cibw-arch: macosx_arm64 | |
| - runs-on: macos-latest | |
| cibw-arch: macosx_universal2 | |
| - runs-on: windows-latest | |
| cibw-arch: win_amd64 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| submodules: true | |
| - uses: pypa/cibuildwheel@v2.19.2 | |
| env: | |
| CIBW_BUILD: "*-${{ matrix.cibw-arch }}" | |
| CIBW_BEFORE_ALL_LINUX: yum install -y zlib-devel libpng-devel | |
| CIBW_TEST_EXTRAS: test | |
| CIBW_TEST_COMMAND: pytest {project}/aicspylibczi/tests | |
| CIBW_ARCHS_MACOS: x86_64 universal2 arm64 | |
| CMAKE_OSX_ARCHITECTURES: ${{ matrix.cibw-arch == 'macosx_x86_64' && 'x86_64' || matrix.cibw-arch == 'macosx_arm64' && 'arm64' || matrix.cibw-arch == 'macosx_universal2' && 'arm64;x86_64' || '' }} | |
| - name: Verify clean directory | |
| run: git diff --exit-code | |
| shell: bash | |
| - name: Upload wheels | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: build-wheels-${{ matrix.cibw-arch }} | |
| path: wheelhouse/*.whl | |
| upload_all: | |
| name: Upload if release | |
| needs: [build_wheels, build_sdist] | |
| runs-on: ubuntu-latest | |
| permissions: | |
| # IMPORTANT: this permission is mandatory for trusted publishing | |
| id-token: write | |
| if: "contains(github.event.head_commit.message, 'Bump version')" | |
| steps: | |
| - uses: actions/setup-python@v5 | |
| - uses: actions/download-artifact@v4 | |
| with: | |
| pattern: build-* | |
| path: dist | |
| merge-multiple: true | |
| - uses: pypa/gh-action-pypi-publish@ec4db0b4ddc65acdf4bff5fa45ac92d78b56bdf0 |