Merge branch 'dev' into axon_parent_validation_fix #32
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name: Python Package using Conda | |
on: [push] | |
jobs: | |
build-windows: | |
runs-on: windows-latest | |
strategy: | |
max-parallel: 5 | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python 3.9 | |
uses: actions/setup-python@v4 | |
with: | |
python-version: '3.9' | |
cache: 'pip' | |
- name: Install dependencies | |
run: | | |
C:\Miniconda\condabin\conda.bat install tqdm openjpeg ruamel.yaml | |
python -m pip install --upgrade pip | |
pip install -r test_requirements.txt -U | |
pip install -r requirements.txt -U | |
pip install -e . | |
- name: Test with pytest | |
run: | | |
python -m pytest tests/ | |
build-linux: | |
runs-on: ubuntu-latest | |
strategy: | |
max-parallel: 5 | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python 3.9 | |
uses: actions/setup-python@v4 | |
with: | |
python-version: '3.9' | |
cache: 'pip' | |
- name: Install dependencies | |
run: | | |
conda install tqdm openjpeg ruamel.yaml | |
python -m pip install --upgrade pip | |
pip install -r test_requirements.txt -U | |
pip install -r requirements.txt -U | |
pip install -e . | |
- name: Lint with flake8 | |
run: | | |
# flake8 already installed via test_requirements.txt | |
# stop the build if there are Python syntax errors or undefined names | |
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
- name: Test with pytest | |
run: | | |
python -m pytest tests/ | |
build-mac: | |
runs-on: macos-latest | |
strategy: | |
max-parallel: 5 | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python 3.9 | |
uses: actions/setup-python@v4 | |
with: | |
python-version: '3.9' | |
cache: 'pip' | |
- name: Set up Conda | |
uses: conda-incubator/setup-miniconda@v3 | |
- name: Install dependencies | |
run: | | |
conda install tqdm openjpeg ruamel.yaml | |
brew install hdf5 | |
export HDF5_DIR="$(brew --prefix hdf5)" | |
python -m pip install --upgrade pip | |
pip install -r test_requirements.txt -U --disable-pip-version-check | |
pip install -r requirements.txt -U --disable-pip-version-check | |
pip install -e . --disable-pip-version-check | |
- name: Test with pytest | |
run: | | |
python -m pytest tests/ |