Mount volume to HDFS datanode containers. Relies on

BD2KGenomics/cgl-docker-lib#68.
BD2KGenomics · Jan 14, 2016 · 92ef9df · 92ef9df
1 parent cc54c33
commit 92ef9df
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/src/toil_scripts/adam_pipeline/spark_toil_script.py b/src/toil_scripts/adam_pipeline/spark_toil_script.py
@@ -265,6 +265,7 @@ def start(self):
                                              "run",
                                              "--net=host",
                                              "-d",
+                                             "-v", "/mnt/ephemeral/:/ephemeral/:rw",
                                              "computationalgenomicslab/apache-hadoop-worker:2.6.2", self.masterIP])[:-1]
         return