##Installation
git clone
# update R3DAlign submodule
git submodule init
git submodule update
cd R3DAlign
# update FR3D submodule
git submodule init
git submodule update
##Configuration
-
CodeIgniter main config
cp application/config/config_template.php application/config/config.php edit application/config/config.php -
Email helper configuration
cp application/config/email_template.php application/config/email.php edit application/config/email.php -
Database connection
cp application/config/database_template.php application/config/database.php edit application/config/database.php -
Server-specific paths
cp application/config/r3dalign_template.php application/config/r3dalign.php edit application/config/r3dalign.php -
Queue management
cp queue/r3dalign_queue_config_template.pl queue/r3dalign_queue_config.pl edit queue/r3dalign_queue_config.pl -
Matlab
cp matlab/importConfigTemplate.m matlab/importConfig.m edit matlab/importConfig.m
##Credits The main computations are performed by R3DAlign and FR3D. This project also uses: