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ENSEMBL database error #5

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kdillmcfarland opened this issue Mar 14, 2023 · 0 comments
Open

ENSEMBL database error #5

kdillmcfarland opened this issue Mar 14, 2023 · 0 comments
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@kdillmcfarland
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Describe the bug

I've been working my way through your BIGslu example and I ran into an error that I wanted to let you know about. It could be a me doing something wrong but when I try to import an ensembl reference I get the following error

"Error in bmRequest(request = request, httr_config = httr_config, verbose = verbose) :
Service Unavailable (HTTP 503)."

Changing the mirror to "useast" solved the problem for me

line 245:
ensembl <- biomaRt::useEnsembl(biomart="ensembl", dataset="hsapiens_gene_ensembl", mirror = "useast")

@kdillmcfarland kdillmcfarland added the bug Something isn't working label Mar 14, 2023
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