Small bugfixes, custom folders export, script templates
This new release adds the following
- You can define output folders for all things now when invoking the builder:
groundTruthDirectory(java.io.File groundTruthDirectory)
Specify the training directory where thes test and train images will be addedtempDirectory(java.io.File groundTruthDirectory)
Specify the temporary directory when using cellpose inferencemodelDirectory(java.io.File groundTruthDirectory)
Specify the where the model will be saved- the Quality Control results remain inside the model directory
- an Omnipose internal variable name had a typo and was fixed. You will have to re-enter the path in in your
Edit > Preferences
if you are using Omnipose - Script templates: Training and detection script templates are now in
Extensions > Cellpose
, Just like the StarDist extension (Thank you @petebankhead) - Names for Cellpose preferences were changed to empahsise how we need the full path to
python.exe
Happy Cellposing