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@BMCV

BMCV

Biomedical Computer Vision Group

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  1. SuperDSM SuperDSM Public

    SuperDSM is a globally optimal segmentation method based on superadditivity and deformable shape models for cell nuclei in fluorescence microscopy images and beyond.

    Python 3

  2. galaxy-image-analysis galaxy-image-analysis Public

    Galaxy tools for image analysis

    Python 15 17

  3. docker-paraviewweb docker-paraviewweb Public

    🐳 ParaViewWeb running in a docker container. This image can be used to integrate ParaViewWeb into Galaxy

    Dockerfile 11 7

  4. segmetrics segmetrics Public

    Image segmentation and object detection performance measures

    Python 2

  5. ColocQuant-ColocJ ColocQuant-ColocJ Public

    Python 1

Repositories

Showing 10 of 13 repositories
  • galaxy-image-analysis Public

    Galaxy tools for image analysis

    BMCV/galaxy-image-analysis’s past year of commit activity
    Python 15 MIT 17 3 0 Updated Oct 17, 2024
  • mobi-fs5-python Public template

    Molecular Biotechnology, Bioinformatik 5. FS, Vertiefungspraktikum Python Standard, Gruppe Rohr

    BMCV/mobi-fs5-python’s past year of commit activity
    Jupyter Notebook 1 MIT 1 0 0 Updated Oct 16, 2024
  • mobi-fs3-python Public template

    Molecular Biotechnology, Methoden der Bioinformatik 3. FS, Bildanalyse, Programmierübungen

    BMCV/mobi-fs3-python’s past year of commit activity
    Jupyter Notebook 1 MIT 0 0 0 Updated Oct 16, 2024
  • github-workflows Public

    GitHub workflows used across many repositories

    BMCV/github-workflows’s past year of commit activity
    0 MIT 0 0 0 Updated Oct 11, 2024
  • segmetrics Public

    Image segmentation and object detection performance measures

    BMCV/segmetrics’s past year of commit activity
    Python 2 MIT 0 0 1 Updated Oct 4, 2024
  • giatools Public

    Tools required for Galaxy Image Analysis

    BMCV/giatools’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 2, 2024
  • SuperDSM Public

    SuperDSM is a globally optimal segmentation method based on superadditivity and deformable shape models for cell nuclei in fluorescence microscopy images and beyond.

    BMCV/SuperDSM’s past year of commit activity
    Python 3 0 1 1 Updated Sep 19, 2024
  • SyntheticData Public
    BMCV/SyntheticData’s past year of commit activity
    0 0 0 0 Updated Aug 9, 2023
  • staged-recipes-random-name Public Forked from conda-forge/staged-recipes

    A place to submit conda recipes before they become fully fledged conda-forge feedstocks

    BMCV/staged-recipes-random-name’s past year of commit activity
    Python 0 BSD-3-Clause 4,990 0 0 Updated Mar 7, 2023
  • ColocQuant-ColocJ Public
    BMCV/ColocQuant-ColocJ’s past year of commit activity
    Python 1 0 0 0 Updated Aug 3, 2022
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