NGS Quality Control

Bioinformatics Training Platform (BTP) Module: NGS Quality Control

• Topic
  • NGS Quality Control
• Target Audience
  • Biologists
  • Non-bioinformaticians
  • Little to no programming expereience
• Prerequisites
  • None
• Key Learning Outcomes
  • Assess the overall quality of NGS (FastQ format) sequence reads
  • Visualise the quality, and other associated matrices, of reads to decide on filters and cutoffs for cleaning up data ready for downstream analysis
  • Clean up adaptors and pre-process the sequence data for further analysis
• Time Required
  • 2 hrs

License

The contents of this repository are released under the Creative Commons Attribution 3.0 Unported License. For a summary of what this means, please see: http://creativecommons.org/licenses/by/3.0/deed.en_GB