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@BackofenLab

Bioinformatics Lab - Department of Computer Science - University Freiburg

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  1. IntaRNA IntaRNA Public

    Efficient target prediction incorporating accessibility of interaction sites

    C++ 44 27

  2. RNA-Playground RNA-Playground Public

    Visualize the inner workings of RNA bioinformatics algorithms for structure prediction, interaction prediction and sequence alignment.

    JavaScript 34 16

  3. GGL GGL Public

    Graph Grammar Library

    C++ 23 6

  4. CRISPRidentify CRISPRidentify Public

    Python 23 6

  5. CRISPRcasIdentifier CRISPRcasIdentifier Public

    Machine learning for accurate identification and classification of CRISPR-Cas systems

    Python 20 6

  6. GraphClust-2 GraphClust-2 Public

    A pipeline for structural clustering of RNA secondary structures

    Python 14 4

Repositories

Showing 10 of 76 repositories
  • BioNetViz Public

    An integrated graph system of biological entities, functional terms, and publications.

    BackofenLab/BioNetViz’s past year of commit activity
    Vue 2 GPL-3.0 0 15 0 Updated Jul 26, 2024
  • Long_Range_RNA_Interactions Public Forked from MatthiasHerrmann/Long_Range_RNA_Interactions

    Genomic long range RNA-RNA interactions in flaviviruses

    BackofenLab/Long_Range_RNA_Interactions’s past year of commit activity
    Python 0 1 1 0 Updated Jul 15, 2024
  • BackofenLab/Optimierung-pages’s past year of commit activity
    JavaScript 0 0 0 0 Updated Jun 26, 2024
  • BackofenLab/BioinformaticsII-pages’s past year of commit activity
    JavaScript 0 0 0 0 Updated Jun 25, 2024
  • BackofenLab/BioinformaticsI-pages’s past year of commit activity
    JavaScript 0 0 0 0 Updated Jun 25, 2024
  • BackofenWeb Public

    Github Pages Repository for the BackofenLab Group Page

    BackofenLab/BackofenWeb’s past year of commit activity
    TeX 0 0 0 0 Updated Jun 17, 2024
  • IntaRNA Public

    Efficient target prediction incorporating accessibility of interaction sites

    BackofenLab/IntaRNA’s past year of commit activity
    C++ 44 27 26 1 Updated May 3, 2024
  • BackofenLab/B2_01_hidden_markov_models’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Apr 30, 2024
  • B2_10_intro_mapping Public template
    BackofenLab/B2_10_intro_mapping’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Apr 16, 2024
  • B2_06_BLAST Public template
    BackofenLab/B2_06_BLAST’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Apr 16, 2024

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