Generate barcode like images representing unique plasmid element hits from you NGS data.
We developed a database of ~10 000 unique plasmid features. We then via SeqFindr screened a set of ST131 genomes described in our paper.
The resultant "plasmid barcode" and similarity cluster dendrogram (higher resolution in figures/ directory) -
Note: There is an alternate (interactive) figure using a D3.js representation
Push REPO from laptop.