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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,35 @@ | ||
| # Author: Subhasis Ray | ||
| # Date: Sun Jul 7 | ||
|
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| basecode_src = ['Element.cpp', | ||
| 'DataElement.cpp', | ||
| 'GlobalDataElement.cpp', | ||
| 'LocalDataElement.cpp', | ||
| 'Eref.cpp', | ||
| 'Finfo.cpp', | ||
| 'DestFinfo.cpp', | ||
| 'Cinfo.cpp', | ||
| 'SrcFinfo.cpp', | ||
| 'ValueFinfo.cpp', | ||
| 'SharedFinfo.cpp', | ||
| 'FieldElementFinfo.cpp', | ||
| 'FieldElement.cpp', | ||
| 'Id.cpp', | ||
| 'ObjId.cpp', | ||
| 'global.cpp', | ||
| 'SetGet.cpp', | ||
| 'OpFuncBase.cpp', | ||
| 'EpFunc.cpp', | ||
| 'HopFunc.cpp', | ||
| 'SparseMatrix.cpp', | ||
| 'doubleEq.cpp', | ||
| 'testAsync.cpp'] | ||
|
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| # On windows we provide getopt | ||
| if is_windows | ||
| basecode_src += '../external/getopt/getopt.c' | ||
| basecode_lib = static_library('basecode', basecode_src, | ||
| include_directories: '../external/getopt') | ||
| else | ||
| basecode_lib = static_library('basecode', basecode_src) | ||
| endif |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,48 @@ | ||
| # Author: Subhasis Ray | ||
| # Date: Sun Jul 7 | ||
|
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| biophysics_src = ['IntFire.cpp', | ||
| 'SpikeGen.cpp', | ||
| 'RandSpike.cpp', | ||
| 'CompartmentDataHolder.cpp', | ||
| 'CompartmentBase.cpp', | ||
| 'Compartment.cpp', | ||
| 'SymCompartment.cpp', | ||
| 'GapJunction.cpp', | ||
| 'ChanBase.cpp', | ||
| 'ChanCommon.cpp', | ||
| 'HHChannel.cpp', | ||
| 'HHChannelBase.cpp', | ||
| 'HHChannel2D.cpp', | ||
| 'HHGate.cpp', | ||
| 'HHGate2D.cpp', | ||
| 'HHChannel2D.cpp', | ||
| 'CaConcBase.cpp', | ||
| 'CaConc.cpp', | ||
| 'MgBlock.cpp', | ||
| 'Nernst.cpp', | ||
| 'Neuron.cpp', | ||
| 'ReadCell.cpp', | ||
| 'SwcSegment.cpp', | ||
| 'ReadSwc.cpp', | ||
| 'SynChan.cpp', | ||
| 'NMDAChan.cpp', | ||
| 'IzhikevichNrn.cpp', | ||
| 'DifShellBase.cpp', | ||
| 'DifShell.cpp', | ||
| 'DifBufferBase.cpp', | ||
| 'DifBuffer.cpp', | ||
| 'MMPump.cpp', | ||
| 'Leakage.cpp', | ||
| 'VectorTable.cpp', | ||
| 'MarkovRateTable.cpp', | ||
| 'MarkovChannel.cpp', | ||
| 'MatrixOps.cpp', | ||
| 'MarkovSolverBase.cpp', | ||
| 'MarkovSolver.cpp', | ||
| 'VClamp.cpp', | ||
| 'Spine.cpp', | ||
| 'MarkovOdeSolver.cpp', | ||
| 'testBiophysics.cpp'] | ||
|
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| biophysics_lib = static_library('biophysics', biophysics_src, dependencies: gsl_dep, include_directories: gsl_dep.get_pkgconfig_variable('includedir')) |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,30 @@ | ||
| # Author: Subhasis Ray | ||
| # Date: Sun Jul 7 | ||
|
|
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| builtins_src = ['Arith.cpp', | ||
| 'Group.cpp', | ||
| 'Mstring.cpp', | ||
| 'Function.cpp', | ||
| 'Variable.cpp', | ||
| 'InputVariable.cpp', | ||
| 'TableBase.cpp', | ||
| 'Table.cpp', | ||
| 'Interpol.cpp', | ||
| 'StimulusTable.cpp', | ||
| 'TimeTable.cpp', | ||
| 'StreamerBase.cpp', | ||
| 'Streamer.cpp', | ||
| 'Stats.cpp', | ||
| 'Interpol2D.cpp', | ||
| 'SpikeStats.cpp', | ||
| 'MooseParser.cpp', | ||
| '../utility/cnpy.cpp', | ||
| '../external/fmt/src/format.cc', | ||
| '../external/fmt/src/os.cc', | ||
| 'testBuiltins.cpp'] | ||
|
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| if host_machine.system() != 'windows' | ||
| builtins_src += files(['SocketStreamer.cpp']) | ||
| endif | ||
|
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| builtins_lib = static_library('builtins', builtins_src, include_directories: ['../external/fmt/include']) |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,9 @@ | ||
| # Author: Subhasis Ray | ||
| # Date: Sun Jul 7 | ||
|
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| device_src = ['PulseGen.cpp', | ||
| 'DiffAmp.cpp', | ||
| 'PIDController.cpp', | ||
| 'RC.cpp'] | ||
|
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| device_lib = static_library('device', device_src) |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,9 @@ | ||
| # Author: Subhasis Ray | ||
| # Date: Sun Jul 7 | ||
|
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| diffusion_src = ['FastMatrixElim.cpp', | ||
| 'DiffPoolVec.cpp', | ||
| 'Dsolve.cpp', | ||
| 'testDiffusion.cpp'] | ||
|
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| diffusion_lib = static_library('diffusion', diffusion_src, include_directories: gsl_dep.get_pkgconfig_variable('includedir')) |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,7 @@ | ||
| # Author: Subhasis Ray | ||
| # Date: Sun Jul 7 | ||
|
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| examples_src = ['Example.cpp', | ||
| 'Ex.cpp'] | ||
|
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| examples_lib = static_library('examples', examples_src) |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,19 @@ | ||
| # Author: Subhasis Ray | ||
| # Date: Sun Jul 7 | ||
|
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| hsolve_src = ['HSolveStruct.cpp', | ||
| 'HinesMatrix.cpp', | ||
| 'Cell.cpp', | ||
| 'HSolvePassive.cpp', | ||
| 'RateLookup.cpp', | ||
| 'HSolveActive.cpp', | ||
| 'HSolveActiveSetup.cpp', | ||
| 'HSolveInterface.cpp', | ||
| 'HSolve.cpp', | ||
| 'HSolveUtils.cpp', | ||
| 'testHSolve.cpp', | ||
| 'ZombieCompartment.cpp', | ||
| 'ZombieCaConc.cpp', | ||
| 'ZombieHHChannel.cpp'] | ||
|
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| hsolve_lib = static_library('hsolve', hsolve_src) |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,12 @@ | ||
| # Author: Subhasis Ray | ||
| # Date: Sun Jul 7 | ||
|
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| intfire_src = ['AdExIF.cpp', | ||
| 'AdThreshIF.cpp', | ||
| 'ExIF.cpp', | ||
| 'IntFireBase.cpp', | ||
| 'IzhIF.cpp', | ||
| 'LIF.cpp', | ||
| 'QIF.cpp', | ||
| 'testIntFire.cpp'] | ||
| intfire_lib = static_library('intfire', intfire_src) |
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