This repository is released for the user who wants to build LipidSig website on their shiny server.
User could clone the whole repository and put it in a folder under /srv/shiny-server/
LipidSig is a highly flexible and user-friendly web server powered by WCCheng Lab in CMU.
It contains 5 main modules: Profiling, Differential Expression, Correlation, Network and Machine Learning.
The LipidSig web service is online at http://chenglab.cmu.edu.tw/lipidsig.
On the LipidSig website, user can identify significant lipid-related features and evaluate lipid effects on cellular(or disease) phenotypes.
In 2021/08/03, we provide the source code of LipidSig on the Lipidsig Github.
To install the LipidSig web service on your own device:
- install shiny-server service
- clone LipidSig and put the folder under /srv/shiny-server/
- http://[your IP address]/LipisSig
CentOS7 or above R 4.0.0 or above Rstudio 1.1 or above Shiny Server v1.5.14.948 or above Node.js v12.18.0 or above
Wen-Jen Lin, Pei-Chun Shen, Hsiu-Cheng Liu, Yi-Chun Cho, Min-Kung Hsu, I-Chen Lin, Fang-Hsin Chen, Juan-Cheng Yang, Wen-Lung Ma, Wei-Chung Cheng, LipidSig: a web-based tool for lipidomic data analysis, Nucleic Acids Research, Volume 49,
Issue W1, 2 July 2021, Pages W336–W345, https://doi.org/10.1093/nar/gkab419