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Release: 3.3.0 (#59)
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arnaudon authored Mar 13, 2023
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67 changes: 57 additions & 10 deletions CHANGELOG.md
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# Changelog

## [Unreleased](https://github.com/BlueBrain/NeuroTS/compare/3.1.1..HEAD)
## [3.3.0](https://github.com/BlueBrain/NeuroTS/compare/3.2.0..3.3.0)

> 6 April 2022
> 13 March 2023
### Uncategorized Changes
### Build

- Use find_namespace_packages instead of find_packages (Adrien Berchet - [#48](https://github.com/BlueBrain/NeuroTS/pull/48))

### New Features

- new trunk generation algorithm (Alexis Arnaudon - [#49](https://github.com/BlueBrain/NeuroTS/pull/49))
- Rework input validation process (Adrien Berchet - [#52](https://github.com/BlueBrain/NeuroTS/pull/52))

### Fixes

- Report errors in list properly (Adrien Berchet - [#51](https://github.com/BlueBrain/NeuroTS/pull/51))

### Chores And Housekeeping

- Apply Copier template (Adrien Berchet - [#57](https://github.com/BlueBrain/NeuroTS/pull/57))
- Fix language detection (Adrien Berchet - [#50](https://github.com/BlueBrain/NeuroTS/pull/50))

### Refactoring and Updates

- Apply Copier template (Adrien Berchet - [#46](https://github.com/BlueBrain/NeuroTS/pull/46))

### CI Improvements

- Separate job for min_versions to speedup the CI (Adrien Berchet - [#58](https://github.com/BlueBrain/NeuroTS/pull/58))
- Apply Copier template (Adrien Berchet - [#55](https://github.com/BlueBrain/NeuroTS/pull/55))
- Test with minimal versions of dependencies (Adrien Berchet - [#53](https://github.com/BlueBrain/NeuroTS/pull/53))

### General Changes

- Use diameter-synthesis by default (Alexis Arnaudon - [#47](https://github.com/BlueBrain/NeuroTS/pull/47))
- Fix schemas and tests (Adrien Berchet - [#44](https://github.com/BlueBrain/NeuroTS/pull/44))

## [3.2.0](https://github.com/BlueBrain/NeuroTS/compare/3.1.1..3.2.0)

> 26 August 2022
### Documentation Changes

- Update DOI to the final article (Adrien Berchet - [#32](https://github.com/BlueBrain/NeuroTS/pull/32))

### CI Improvements

- Use codespellignorelines files for format job (Adrien Berchet - [#41](https://github.com/BlueBrain/NeuroTS/pull/41))
- Publish wheels on Pypi (Adrien Berchet - [#40](https://github.com/BlueBrain/NeuroTS/pull/40))
- Use commitlint to check PR titles (Adrien Berchet - [#39](https://github.com/BlueBrain/NeuroTS/pull/39))
- Move black, codespell, isort, pycodestyle and pydocstyle from tox to pre-commit (Adrien Berchet - [#29](https://github.com/BlueBrain/NeuroTS/pull/29))

### General Changes

- Bar length warning under skip_validation (lidakanari - [#43](https://github.com/BlueBrain/NeuroTS/pull/43))
- Compatibility of NeuriteType with NeuroM/MorphIO (Alexis Arnaudon - [#42](https://github.com/BlueBrain/NeuroTS/pull/42))
- Update targeting/randomness to paper values (Alexis Arnaudon - [#30](https://github.com/BlueBrain/NeuroTS/pull/30))
- Automatically build MyBinder docker image for each tag (Adrien Berchet - [#28](https://github.com/BlueBrain/NeuroTS/pull/28))
- Update scipy requirement because of QHullError (Adrien Berchet - [#27](https://github.com/BlueBrain/NeuroTS/pull/27))
- Fix warnings (Eleftherios Zisis - [#25](https://github.com/BlueBrain/NeuroTS/pull/25))
- Update build-system (Eleftherios Zisis - [#26](https://github.com/BlueBrain/NeuroTS/pull/26))
- Explicitely states where the examples and related data are located (Adrien Berchet - [#24](https://github.com/BlueBrain/NeuroTS/pull/24))
- Remove useless installation of several packages in Github CI (Adrien Berchet - [#23](https://github.com/BlueBrain/NeuroTS/pull/23))
- Setup MyBinder (Adrien Berchet - [#22](https://github.com/BlueBrain/NeuroTS/pull/22))
- Fix auto-changelog configuration (Adrien Berchet - [ddfc476](https://github.com/BlueBrain/NeuroTS/commit/ddfc476549712d8b2e1e28de06a1d30d48b5d1a9))
- Allow empty type (Adrien Berchet - [5aa5d9c](https://github.com/BlueBrain/NeuroTS/commit/5aa5d9c4096fc83edfcc874cbd237067fa39ace0))

### CI Improvements

- Move black, codespell, isort, pycodestyle and pydocstyle from tox to pre-commit (Adrien Berchet - [90b0667](https://github.com/BlueBrain/NeuroTS/commit/90b0667a6f87bb72bc7fe76cb9688747437d2607))

## [3.1.1](https://github.com/BlueBrain/NeuroTS/compare/3.1.0..3.1.1)

> 2 March 2022
### Uncategorized Changes
### General Changes

- Setup CodeCov (Adrien Berchet - [#20](https://github.com/BlueBrain/NeuroTS/pull/20))

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2 changes: 1 addition & 1 deletion setup.py
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"matplotlib>=3.2.1",
"morphio>=3.3.3,<4.0",
"neurom>=3.0,<4.0",
"numpy>=1.21.0",
"numpy>=1.22.0",
"scipy>=1.6",
"tmd>=2.2.0",
"diameter-synthesis>=0.5.2",
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