Test: Bump NeuroTS and update the tests

BlueBrain · Nov 27, 2023 · ccf8708 · ccf8708
1 parent 7a92168
commit ccf8708
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Showing 7 changed files with 2 additions and 15 deletions.
diff --git a/requirements/base.pip b/requirements/base.pip
@@ -18,7 +18,7 @@ morphio>=3.3.6,<4
 neuroc>=0.2.8,<1
 neurocollage>=0.3.0
 neurom>=3.2.2,<4
-neurots>=3.4.2,<4
+neurots>=3.5,<4
 numpy>=1.24.1
 pandas>=1.5.3
 placement_algorithm>=2.3.1

diff --git a/src/version.py b/src/version.py
@@ -1,2 +1,2 @@
 """Package version."""
-VERSION = "1.1.0"
+VERSION = "1.2.0.dev0"
diff --git a/tests/data/complete_tmd_parameters.json b/tests/data/complete_tmd_parameters.json
@@ -47,7 +47,6 @@
                     0.0
                 ]
             ],
-            "radius": 0.3,
             "randomness": 0.24,
             "step_size": {
                 "norm": {
@@ -64,7 +63,6 @@
             "metric": "path_distances",
             "modify": null,
             "orientation": null,
-            "radius": 0.3,
             "randomness": 0.24,
             "step_size": {
                 "norm": {

diff --git a/tests/data/in_small_O1/out/synthesis/neurots_input/tmd_parameters.json b/tests/data/in_small_O1/out/synthesis/neurots_input/tmd_parameters.json
@@ -9,7 +9,6 @@
                 "metric": "path_distances",
                 "modify": null,
                 "orientation": null,
-                "radius": 0.3,
                 "randomness": 0.24,
                 "step_size": {
                     "norm": {
@@ -69,7 +68,6 @@
                         0.0
                     ]
                 ],
-                "radius": 0.3,
                 "randomness": 0.24,
                 "step_size": {
                     "norm": {
@@ -87,7 +85,6 @@
                 "metric": "path_distances",
                 "modify": null,
                 "orientation": null,
-                "radius": 0.3,
                 "randomness": 0.24,
                 "step_size": {
                     "norm": {

diff --git a/tests/data/in_vacuum/out/synthesis/neurots_input/tmd_parameters.json b/tests/data/in_vacuum/out/synthesis/neurots_input/tmd_parameters.json
@@ -9,7 +9,6 @@
                 "metric": "path_distances",
                 "modify": null,
                 "orientation": null,
-                "radius": 0.3,
                 "randomness": 0.24,
                 "step_size": {
                     "norm": {
@@ -69,7 +68,6 @@
                         0.0
                     ]
                 ],
-                "radius": 0.3,
                 "randomness": 0.24,
                 "step_size": {
                     "norm": {
@@ -87,7 +85,6 @@
                 "metric": "path_distances",
                 "modify": null,
                 "orientation": null,
-                "radius": 0.3,
                 "randomness": 0.24,
                 "step_size": {
                     "norm": {

diff --git a/tests/data/raw_tmd_parameters.json b/tests/data/raw_tmd_parameters.json
@@ -12,7 +12,6 @@
                     0.0
                 ]
             ],
-            "radius": 0.3,
             "randomness": 0.24,
             "step_size": {
                 "norm": {
@@ -30,7 +29,6 @@
             "metric": "path_distances",
             "modify": null,
             "orientation": null,
-            "radius": 0.3,
             "randomness": 0.24,
             "step_size": {
                 "norm": {

diff --git a/tests/data/synthesis_input/tmd_specific_parameters.json b/tests/data/synthesis_input/tmd_specific_parameters.json
@@ -8,7 +8,6 @@
             "metric": "path_distances",
             "modify": null,
             "orientation": null,
-            "radius": 0.3,
             "randomness": 0.24,
             "step_size": {
                 "norm": {
@@ -66,7 +65,6 @@
                     0.0
                 ]
             ],
-            "radius": 0.3,
             "randomness": 0.24,
             "step_size": {
                 "norm": {
@@ -84,7 +82,6 @@
             "metric": "path_distances",
             "modify": null,
             "orientation": null,
-            "radius": 0.3,
             "randomness": 0.24,
             "step_size": {
                 "norm": {