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DOC: Update MinSize docs to add warnings about removed/replaced data
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Signed-off-by: Michael Jackson <mike.jackson@bluequartz.net>
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imikejackson committed Aug 19, 2024
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Expand Up @@ -11,6 +11,18 @@ This **Filter** removes **Features** that have a total number of **Cells** below

The **Filter** can be run in a mode where the minimum number of neighbors is applied to a single **Ensemble**. The user can select to apply the minimum to one specific **Ensemble**.

## Warning: Cell Level Data Will Be Changed

Cells that are part of features that are smaller than the minimum size threshold will have their DataArray values **replaced** with values from neighboring cells that are within a valid feature, i.e., features that are removed have their cell level data replaced with neighboring larger features.

## WARNING: Feature Data Will Become Invalid

By modifying the cell level data, any feature data that was previously computed will most likely be invalid at this point. Filters such as "Find Sizes", "Find Shapes" should be re-run if you want accurate final results from your pipeline.

## WARNING: NeighborList Removal

If the Cell Feature AttributeMatrix contains any *NeighborList* data arrays, those arrays will be **REMOVED** because those lists are now invalid. Re-run the *Find Neighbors* filter to re-create the lists.

## Notes ##

If any features are removed **and** the Cell Feature AttributeMatrix contains any _NeighborList_ data arrays those arrays will be **REMOVED** because those lists are now invalid. Re-run the _Find Neighbors_ filter to re-create the lists.
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6 changes: 6 additions & 0 deletions Website/docs/Latest_Release_Notes.md
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Expand Up @@ -6,8 +6,14 @@ hide:

## Known Issues ##

These are issues that are currently known to exist in Version 6.5.171 of DREAM.3D. You can try to use
a nightly build located at [https://dream3d.bluequartz.net/binaries/experimental](https://dream3d.bluequartz.net/binaries/experimental]) and see if the issue still persists. The official bug tracker is at [https://www.github.com/bluequartzsoftware/dream3d/issues](https://www.github.com/bluequartzsoftware/dream3d/issues)

- Match Crystallography: The Average Quaternions that are generated may not be correct. As a work around, use the "Delete Data" filter to remove the FeatureData / Average Quaternions and then regenerate them by using the "Convert Orientation Representation" filter to convert the Average Euler Angles to Quaternions.
- Read Oxford Instruments CTF File: There is an issue where the phase data values will be incremented from 0 to 1 under certain conditions. The workaround is to first convert the data to an H5EBSD file, then read the data from the H5EBSD file in DREAM.3D.
- DREAM.3D will crash when attempting to use the "Import HDF5 Dataset" filter.
- Setting the DataDirectory will crash DREAM3D 6.5.xx and 6.6.xx
- DAMASK microstructure generation is not correct in version 6.5

## Version 6.5.171 Release Notes ##

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