RIS Docker Images

A collection of Dockerfiles and other scripts used on the WashU RIS Compute platform.

Folders

• DeepLabCut: Docker image and scripts for using DeepLabCut on RIS, making use of GPUs. Updated from rob-the-bot/washu_hpc. Includes: updated DEEPLABCUT.yaml conda environment that works alongside the Docker image; job_deeplabcut.sh script to execute from $HOME directory; and train.py for long jobs submitted outside the general-interactive job queue.

• SCENIC+: Docker image and scripts for using the SCENIC+ Python library with Jupyter Notebook on RIS, making use of GPUs.

License

This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License.

Issues and Feedback

Please contact Henry Burgess <henry.burgess@wustl.edu> for all code-related issues and feedback.