Add muse qc check #157
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Add muse qc check #157
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Add MUSE quality check test script. This script tried two functions: muse_qc.getMHD_from_RefROIs() and muse_qc.getMHD_from_RefModel() using v1.1/istaging.pkl.gz MUSE ROIs data.
Update muse_qc.py with 2 functions: 1. getMHD_from_RefROIs() -Accepts inputROis, refROIs, and n_components (default=3) -Returns MHD result, ref-based scaler and ref-based PCA model 2. getMHD_from_RefModel() -Accepts inputROIs, ref-based scaler, ref-based PCA model and n_components (default=3) -Returns MHD result
Use output (ref-scaler, ref-model) from getMHD_from_RefROIs() as input for getMHD_from_RefModel().
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Updated muse_qc.py and added NiBAx/tests/test_muse_qc.py